G1887976


Basic Information

Item Value
gene id G1887976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61422405 ~ 61422957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159789
ctactactactactgctgctgctacaactagtacaactactgcagctgctactactagtactactattactgctactactactactactactactgctgctgcaactagtacaactactgctgctactactagtacaacaactactactactactgctgctgctacaactactactactactgctgctgctacaactagtacaactactgctgctgctactactagtactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159789 True 232 lncRNA 0.42 2 61422405 61422957

Neighbor

gene id symbol gene type direction distance location
LOC110516668 lmbrd1 coding upstream 515053 60646066 ~ 60907352 (+)
col9a1b LOC106560234 coding upstream 1051344 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 1248276 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 1449871 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 1555630 59847111 ~ 59866775 (+)
LOC118943928 LOC106577473 coding downstream 70700 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 118195 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 135054 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 183067 61606024 ~ 61614271 (+)
LOC118943838 LOC106577289 coding downstream 193025 61615982 ~ 61620197 (+)
G1887969 NA non-coding upstream 4071 61418060 ~ 61418334 (+)
G1887968 NA non-coding upstream 4494 61417632 ~ 61417911 (+)
G1887928 NA non-coding upstream 56675 61365432 ~ 61365730 (+)
G1887923 NA non-coding upstream 60794 61361142 ~ 61361611 (+)
G1887899 NA non-coding upstream 84444 61337132 ~ 61337961 (+)
G1887979 NA non-coding downstream 820 61423777 ~ 61424338 (+)
G1887983 NA non-coding downstream 3610 61426567 ~ 61426796 (+)
G1887985 NA non-coding downstream 5334 61428291 ~ 61428492 (+)
G1888060 NA non-coding downstream 94382 61517339 ~ 61517574 (+)
G1887835 NA other upstream 144642 61276775 ~ 61277763 (+)
G1886561 NA other upstream 1634416 59783986 ~ 59787989 (+)
G1886560 NA other upstream 1636310 59749718 ~ 59786095 (+)
G1886558 NA other upstream 1685934 59727746 ~ 59736471 (+)
G1888298 NA other downstream 503789 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1141568 62564525 ~ 62565083 (+)

Expression


Co-expression Network