G1887980



Basic Information


Item Value
gene id G1887980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61423666 ~ 61424290 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2159796
GAATAACACTGGCTGTACTGTATAACATCCAAATATAACCCTAGAATAACACTGGCTGTACTGGATGAGATCACAATATAACCCTAGAATAACACTGGCTGTACTGGATGAGATCAAAATATAACCCTAGAATAACACTGGCTGCACTGTATGAGATCACAATATAACCCTAGAATAACACTGGCTGTACTGTATAACATCACAATATAACCCTAGAATAACACTGGCTGCACTGTAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2159796 True 238 lncRNA 0.38 2 61423666 61424290

Neighbor


gene id symbol gene type direction distance location
LOC110512348 LOC100135993 coding downstream 24377 61395693 ~ 61399289 (-)
adgrb3 adgrb3 coding downstream 149049 60939373 ~ 61274617 (-)
LOC110515674 col19a1 coding downstream 790372 60371446 ~ 60633294 (-)
LOC110514479 LOC106594326 coding downstream 1102824 60266566 ~ 60320842 (-)
LOC118936588 LOC106613623 coding downstream 1160392 60232501 ~ 60263274 (-)
LOC118943930 LOC106577366 coding upstream 566798 61991088 ~ 62010652 (-)
slc1a4 slc1a4 coding upstream 595138 62019428 ~ 62062283 (-)
LOC118943932 NA coding upstream 610687 62034977 ~ 62038662 (-)
LOC118943934 LOC106592896 coding upstream 695640 62119930 ~ 62147728 (-)
LOC118943840 NA coding upstream 729615 62152136 ~ 62164324 (-)
G1887929 NA non-coding downstream 57601 61365809 ~ 61366065 (-)
G1887926 NA non-coding downstream 59151 61364300 ~ 61364515 (-)
G1887917 NA non-coding downstream 74135 61343509 ~ 61349531 (-)
G1887852 NA non-coding downstream 135685 61287740 ~ 61287981 (-)
G1887839 NA non-coding downstream 144575 61278723 ~ 61279091 (-)
G1887984 NA non-coding upstream 2194 61426484 ~ 61426720 (-)
G1888056 NA non-coding upstream 88584 61512874 ~ 61513163 (-)
G1888104 NA non-coding upstream 135760 61560050 ~ 61560681 (-)
G1888557 NA non-coding upstream 165412 61589702 ~ 61590671 (-)
G1888646 NA non-coding upstream 331233 61755523 ~ 61756783 (-)
G1887761 NA other downstream 272496 61150056 ~ 61151170 (-)
G1887449 NA other downstream 597876 60774110 ~ 60825790 (-)
G1886838 NA other downstream 1426603 59995384 ~ 59997063 (-)
G1886825 NA other downstream 1457000 59966362 ~ 59966666 (-)
gpr75 gpr75 other downstream 2071796 59346393 ~ 59351909 (-)
G1888836 LOC106562881 other upstream 836547 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 845332 62258118 ~ 62273944 (-)

Expression



Co-expression Network