Gene
RNA
| Item | Value |
|---|---|
| gene id | G1887979 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 61423777 ~ 61424338 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2159793 | True | 433 | lncRNA | 0.40 | 2 | 61423777 | 61424338 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516668 | lmbrd1 | coding | upstream | 516425 | 60646066 ~ 60907352 (+) |
| col9a1b | LOC106560234 | coding | upstream | 1052716 | 60325289 ~ 60371061 (+) |
| slc35f3b | slc35f3 | coding | upstream | 1249648 | 60012705 ~ 60174129 (+) |
| LOC110503042 | kcnk1 | coding | upstream | 1451243 | 59962215 ~ 59972534 (+) |
| LOC110503015 | LOC106589751 | coding | upstream | 1557002 | 59847111 ~ 59866775 (+) |
| LOC118943928 | LOC106577473 | coding | downstream | 69319 | 61493657 ~ 61522049 (+) |
| LOC118943929 | LOC106577282 | coding | downstream | 116814 | 61541152 ~ 61555170 (+) |
| LOC110532895 | LOC106577282 | coding | downstream | 133673 | 61558011 ~ 61575674 (+) |
| LOC110522442 | LOC106577282 | coding | downstream | 181686 | 61606024 ~ 61614271 (+) |
| LOC118943838 | LOC106577289 | coding | downstream | 191644 | 61615982 ~ 61620197 (+) |
| G1887976 | NA | non-coding | upstream | 820 | 61422405 ~ 61422957 (+) |
| G1887969 | NA | non-coding | upstream | 5443 | 61418060 ~ 61418334 (+) |
| G1887968 | NA | non-coding | upstream | 5866 | 61417632 ~ 61417911 (+) |
| G1887928 | NA | non-coding | upstream | 58047 | 61365432 ~ 61365730 (+) |
| G1887923 | NA | non-coding | upstream | 62166 | 61361142 ~ 61361611 (+) |
| G1887983 | NA | non-coding | downstream | 2229 | 61426567 ~ 61426796 (+) |
| G1887985 | NA | non-coding | downstream | 3953 | 61428291 ~ 61428492 (+) |
| G1888060 | NA | non-coding | downstream | 93001 | 61517339 ~ 61517574 (+) |
| G1888083 | NA | non-coding | downstream | 120193 | 61544531 ~ 61545634 (+) |
| G1887835 | NA | other | upstream | 146014 | 61276775 ~ 61277763 (+) |
| G1886561 | NA | other | upstream | 1635788 | 59783986 ~ 59787989 (+) |
| G1886560 | NA | other | upstream | 1637682 | 59749718 ~ 59786095 (+) |
| G1886558 | NA | other | upstream | 1687306 | 59727746 ~ 59736471 (+) |
| G1888298 | NA | other | downstream | 502408 | 61926746 ~ 61927857 (+) |
| G1888544 | NA | other | downstream | 1140187 | 62564525 ~ 62565083 (+) |
