G1887983


Basic Information

Item Value
gene id G1887983
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61426567 ~ 61426796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2159800
atttagaccctttgctatgagactggaaattgagctcaggtgcatcctgattccattgatcatccttgagatgtttctacaacttgattggagtccacctgtggtaaattcaattgattggacatgatttagaaaagcacacacctgtctatataggatcccatagttgacagtgccctgtcagaacaaaaaccaagccatgaggtcaaaggaattgtccgtagagcgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2159800 True 230 lncRNA 0.43 1 61426567 61426796

Neighbor

gene id symbol gene type direction distance location
LOC110516668 lmbrd1 coding upstream 519215 60646066 ~ 60907352 (+)
col9a1b LOC106560234 coding upstream 1055506 60325289 ~ 60371061 (+)
slc35f3b slc35f3 coding upstream 1252438 60012705 ~ 60174129 (+)
LOC110503042 kcnk1 coding upstream 1454033 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 1559792 59847111 ~ 59866775 (+)
LOC118943928 LOC106577473 coding downstream 66861 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 114356 61541152 ~ 61555170 (+)
LOC110532895 LOC106577282 coding downstream 131215 61558011 ~ 61575674 (+)
LOC110522442 LOC106577282 coding downstream 179228 61606024 ~ 61614271 (+)
LOC118943838 LOC106577289 coding downstream 189186 61615982 ~ 61620197 (+)
G1887979 NA non-coding upstream 2229 61423777 ~ 61424338 (+)
G1887976 NA non-coding upstream 3610 61422405 ~ 61422957 (+)
G1887969 NA non-coding upstream 8233 61418060 ~ 61418334 (+)
G1887968 NA non-coding upstream 8656 61417632 ~ 61417911 (+)
G1887928 NA non-coding upstream 60837 61365432 ~ 61365730 (+)
G1887985 NA non-coding downstream 1495 61428291 ~ 61428492 (+)
G1888060 NA non-coding downstream 90543 61517339 ~ 61517574 (+)
G1888083 NA non-coding downstream 117735 61544531 ~ 61545634 (+)
G1888096 NA non-coding downstream 132731 61559527 ~ 61561164 (+)
G1887835 NA other upstream 148804 61276775 ~ 61277763 (+)
G1886561 NA other upstream 1638578 59783986 ~ 59787989 (+)
G1886560 NA other upstream 1640472 59749718 ~ 59786095 (+)
G1886558 NA other upstream 1690096 59727746 ~ 59736471 (+)
G1888298 NA other downstream 499950 61926746 ~ 61927857 (+)
G1888544 NA other downstream 1137729 62564525 ~ 62565083 (+)

Expression


Co-expression Network