Gene
RNA
| Item | Value |
|---|---|
| gene id | G1888104 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 61560050 ~ 61560681 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2159932 | False | 221 | lncRNA | 0.39 | 2 | 61560050 | 61560681 |
| TU2159933 | True | 221 | lncRNA | 0.39 | 2 | 61560050 | 61560517 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512348 | LOC100135993 | coding | downstream | 160761 | 61395693 ~ 61399289 (-) |
| adgrb3 | adgrb3 | coding | downstream | 285433 | 60939373 ~ 61274617 (-) |
| LOC110515674 | col19a1 | coding | downstream | 926756 | 60371446 ~ 60633294 (-) |
| LOC110514479 | LOC106594326 | coding | downstream | 1239208 | 60266566 ~ 60320842 (-) |
| LOC118936588 | LOC106613623 | coding | downstream | 1296776 | 60232501 ~ 60263274 (-) |
| LOC118943930 | LOC106577366 | coding | upstream | 430407 | 61991088 ~ 62010652 (-) |
| slc1a4 | slc1a4 | coding | upstream | 458747 | 62019428 ~ 62062283 (-) |
| LOC118943932 | NA | coding | upstream | 474296 | 62034977 ~ 62038662 (-) |
| LOC118943934 | LOC106592896 | coding | upstream | 559249 | 62119930 ~ 62147728 (-) |
| LOC118943840 | NA | coding | upstream | 593224 | 62152136 ~ 62164324 (-) |
| G1888056 | NA | non-coding | downstream | 46887 | 61512874 ~ 61513163 (-) |
| G1887984 | NA | non-coding | downstream | 133330 | 61426484 ~ 61426720 (-) |
| G1887980 | NA | non-coding | downstream | 135760 | 61423666 ~ 61424290 (-) |
| G1887929 | NA | non-coding | downstream | 193985 | 61365809 ~ 61366065 (-) |
| G1887926 | NA | non-coding | downstream | 195535 | 61364300 ~ 61364515 (-) |
| G1888557 | NA | non-coding | upstream | 29021 | 61589702 ~ 61590671 (-) |
| G1888646 | NA | non-coding | upstream | 194842 | 61755523 ~ 61756783 (-) |
| G1888668 | NA | non-coding | upstream | 228333 | 61789014 ~ 61789906 (-) |
| G1888698 | NA | non-coding | upstream | 310828 | 61871509 ~ 61872582 (-) |
| G1888716 | NA | non-coding | upstream | 341386 | 61902067 ~ 61902744 (-) |
| G1887761 | NA | other | downstream | 408880 | 61150056 ~ 61151170 (-) |
| G1887449 | NA | other | downstream | 734260 | 60774110 ~ 60825790 (-) |
| G1886838 | NA | other | downstream | 1562987 | 59995384 ~ 59997063 (-) |
| G1886825 | NA | other | downstream | 1593384 | 59966362 ~ 59966666 (-) |
| gpr75 | gpr75 | other | downstream | 2208180 | 59346393 ~ 59351909 (-) |
| G1888836 | LOC106562881 | other | upstream | 700156 | 62260837 ~ 62267505 (-) |
| LOC110532867 | LOC106562881 | other | upstream | 708941 | 62258118 ~ 62273944 (-) |
