G1888170


Basic Information

Item Value
gene id G1888170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61672976 ~ 61673579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160014
TCCAGTGAGCTATTAGTTCCTGTGGTGTAGTCCTTTGAGATACTATTTGTTCCTGTGGTGTAGTCCTTTGAGATACTATTTGTTCCTGTGGTGTAGTCATTTGAGATACTATTAGTTTCTGTGGTGTAGTCATTTGAGATACTATTTGTTCTTGTGGTGTAGTCCAGTGAGCTATTTGTTCATGTGGAATAATCCAGTGAGCTattagtttctgtagtgtagACCAGTGAGCTAATACAGTAGACAACAATACCAGTAGTATATTTGGTGTATTCCAGTGAGCTAAAACAATGTTGGATAAAATAATGGCCTTTAGGTTGTGTAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160014 True 328 lncRNA 0.38 2 61672976 61673579

Neighbor

gene id symbol gene type direction distance location
LOC118943838 LOC106577289 coding upstream 52779 61615982 ~ 61620197 (+)
LOC110522442 LOC106577282 coding upstream 58705 61606024 ~ 61614271 (+)
LOC110532895 LOC106577282 coding upstream 97302 61558011 ~ 61575674 (+)
LOC118943929 LOC106577282 coding upstream 117806 61541152 ~ 61555170 (+)
LOC118943928 LOC106577473 coding upstream 150927 61493657 ~ 61522049 (+)
LOC118943839 LOC106577359 coding downstream 70170 61743749 ~ 61815674 (+)
LOC110516873 LOC105008825 coding downstream 149886 61823465 ~ 61990656 (+)
LOC118943931 NA coding downstream 364076 62036002 ~ 62038690 (+)
LOC110531647 LOC106592896 coding downstream 404434 62078013 ~ 62114232 (+)
LOC110516194 LOC106562987 coding downstream 618160 62291739 ~ 62339471 (+)
G1888161 NA non-coding upstream 23490 61649054 ~ 61649486 (+)
G1888129 NA non-coding upstream 81986 61589736 ~ 61590990 (+)
G1888128 NA non-coding upstream 84612 61587587 ~ 61588364 (+)
G1888096 NA non-coding upstream 111812 61559527 ~ 61561164 (+)
G1888083 NA non-coding upstream 127342 61544531 ~ 61545634 (+)
G1888238 NA non-coding downstream 128423 61802002 ~ 61802900 (+)
G1888251 NA non-coding downstream 161031 61834610 ~ 61835067 (+)
G1888257 NA non-coding downstream 177800 61851379 ~ 61852170 (+)
G1888265 NA non-coding downstream 192595 61866174 ~ 61866540 (+)
G1888302 NA non-coding downstream 258932 61932511 ~ 61932786 (+)
G1887835 NA other upstream 395213 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1502196 60012705 ~ 60174129 (+)
G1886561 NA other upstream 1884987 59783986 ~ 59787989 (+)
G1886560 NA other upstream 1886881 59749718 ~ 59786095 (+)
G1886558 NA other upstream 1936505 59727746 ~ 59736471 (+)
G1888298 NA other downstream 253167 61926746 ~ 61927857 (+)
G1888544 NA other downstream 890946 62564525 ~ 62565083 (+)

Expression


Co-expression Network