G1888257


Basic Information

Item Value
gene id G1888257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61851379 ~ 61852170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160113
ctgtccggaacctccaatgacGGGCCACtgaccggaacctccaacgacggtcaaCAGTCCGGAGCCTGTTTCTGTTTAttgtctgcacctgacaggactatTTCgtttttccctctttgttattttgtttgagtgttttgagTATTAAATGTATCATGAGCACTTACCACGCTCAgttttggtccactccttcatACGACGATCGTTACACCTGCTGTATGTGATGTCACAGGGATGTTTTAATATAGAATATTGACCTATTAGTTTTAGTCCTGCTGTGTGTGATGTCATGGGGATGTTTAATATAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160113 True 311 lncRNA 0.43 2 61851379 61852170

Neighbor

gene id symbol gene type direction distance location
LOC118943839 LOC106577359 coding upstream 35705 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 231182 61615982 ~ 61620197 (+)
LOC110522442 LOC106577282 coding upstream 237108 61606024 ~ 61614271 (+)
LOC110532895 LOC106577282 coding upstream 275705 61558011 ~ 61575674 (+)
LOC118943929 LOC106577282 coding upstream 296209 61541152 ~ 61555170 (+)
LOC118943931 NA coding downstream 185485 62036002 ~ 62038690 (+)
LOC110531647 LOC106592896 coding downstream 225843 62078013 ~ 62114232 (+)
LOC110516194 LOC106562987 coding downstream 439569 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 491231 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 563490 62415660 ~ 62416166 (+)
G1888251 NA non-coding upstream 16312 61834610 ~ 61835067 (+)
G1888238 NA non-coding upstream 48479 61802002 ~ 61802900 (+)
G1888170 NA non-coding upstream 177800 61672976 ~ 61673579 (+)
G1888161 NA non-coding upstream 201893 61649054 ~ 61649486 (+)
G1888129 NA non-coding upstream 260389 61589736 ~ 61590990 (+)
G1888265 NA non-coding downstream 14004 61866174 ~ 61866540 (+)
G1888302 NA non-coding downstream 80341 61932511 ~ 61932786 (+)
G1888309 NA non-coding downstream 97038 61949208 ~ 61949464 (+)
G1888315 NA non-coding downstream 103887 61956057 ~ 61956327 (+)
G1888316 NA non-coding downstream 108531 61960701 ~ 61961013 (+)
G1887835 NA other upstream 573616 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1680599 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2063390 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2065284 59749718 ~ 59786095 (+)
G1886558 NA other upstream 2114908 59727746 ~ 59736471 (+)
G1888298 NA other downstream 74576 61926746 ~ 61927857 (+)
G1888544 NA other downstream 712355 62564525 ~ 62565083 (+)

Expression


Co-expression Network