G1888309


Basic Information

Item Value
gene id G1888309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61949208 ~ 61949464 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160172
CCTCCCTGGTGTAAAATCCAGTGAATCAGTGGTCAGTGCTAAAATGGGAAGAGAAcaagggagaaagaggcaggcagCATTATTGAATCAACTATGCGTTTAGAACTAGTAAGCTGTTGATTGTAATTGATAATCACTGGGATTAGTTATTGTCCCCCTAGCTACCAGCAGTGAACATTATGTAGGGTATTTGAAATGTTGCTCGCCTGCCAAGAACCTTTGTTAGCAGCGACTAATGAAAAGAAAATGGGGATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160172 True 257 lncRNA 0.42 1 61949208 61949464

Neighbor

gene id symbol gene type direction distance location
LOC118943839 LOC106577359 coding upstream 133534 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 329011 61615982 ~ 61620197 (+)
LOC110522442 LOC106577282 coding upstream 334937 61606024 ~ 61614271 (+)
LOC110532895 LOC106577282 coding upstream 373534 61558011 ~ 61575674 (+)
LOC118943929 LOC106577282 coding upstream 394038 61541152 ~ 61555170 (+)
LOC118943931 NA coding downstream 88191 62036002 ~ 62038690 (+)
LOC110531647 LOC106592896 coding downstream 128549 62078013 ~ 62114232 (+)
LOC110516194 LOC106562987 coding downstream 342275 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 393937 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 466196 62415660 ~ 62416166 (+)
G1888302 NA non-coding upstream 16422 61932511 ~ 61932786 (+)
G1888265 NA non-coding upstream 82668 61866174 ~ 61866540 (+)
G1888257 NA non-coding upstream 97038 61851379 ~ 61852170 (+)
G1888251 NA non-coding upstream 114141 61834610 ~ 61835067 (+)
G1888238 NA non-coding upstream 146308 61802002 ~ 61802900 (+)
G1888315 NA non-coding downstream 6593 61956057 ~ 61956327 (+)
G1888316 NA non-coding downstream 11237 61960701 ~ 61961013 (+)
G1888317 NA non-coding downstream 12923 61962387 ~ 61962698 (+)
G1888322 NA non-coding downstream 25872 61975336 ~ 61975548 (+)
G1888335 LOC106560778 non-coding downstream 59405 62008869 ~ 62010790 (+)
G1888298 NA other upstream 21351 61926746 ~ 61927857 (+)
G1887835 NA other upstream 671445 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1778428 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2161219 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2163113 59749718 ~ 59786095 (+)
G1888544 NA other downstream 615061 62564525 ~ 62565083 (+)

Expression


Co-expression Network