G1888750


Basic Information

Item Value
gene id G1888750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61950495 ~ 61951182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160764
GATAAATATAGTTCCGTTACTCACCATCAAGGAACATATAGTTTTGTTTCTCACCATCAAGGGACATATAGTTCCGTTACTCACCATCAACAAACATATAGTTCTGTTACTCACCATCAACAAACATATAGTTCTGTTACTCACCATCAAGACAAATATAGTTCTGTTACTCACCATCAACAAACATTTAATTCTGTTACTCACCATCAACAAACATATAGTTCTGTTACTCACCATCAACAAACATATAGTTCTGTTACTCACCATCAAGGGACGTATAGTTCTGTTACTCACCATCAAGGGACATATAGTTCTGTTACTCACCATCAAGGGACATATAGTTCTGTTACTCACCATCAAGGGACATATAGTTCTGTTACTCACCATCAAGGGACATATAGTTCTGTTACTCACCATCAAGGGACATATAGTTATGTTACTCACCATC

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160764 True 448 lncRNA 0.37 2 61950495 61951182

Neighbor

gene id symbol gene type direction distance location
LOC110512348 LOC100135993 coding downstream 551206 61395693 ~ 61399289 (-)
adgrb3 adgrb3 coding downstream 675878 60939373 ~ 61274617 (-)
LOC110515674 col19a1 coding downstream 1317201 60371446 ~ 60633294 (-)
LOC110514479 LOC106594326 coding downstream 1629653 60266566 ~ 60320842 (-)
LOC118936588 LOC106613623 coding downstream 1687221 60232501 ~ 60263274 (-)
LOC118943930 LOC106577366 coding upstream 39906 61991088 ~ 62010652 (-)
slc1a4 slc1a4 coding upstream 68246 62019428 ~ 62062283 (-)
LOC118943932 NA coding upstream 83795 62034977 ~ 62038662 (-)
LOC118943934 LOC106592896 coding upstream 168748 62119930 ~ 62147728 (-)
LOC118943840 NA coding upstream 202723 62152136 ~ 62164324 (-)
G1888748 NA non-coding downstream 5667 61943134 ~ 61944828 (-)
G1888747 NA non-coding downstream 9116 61941161 ~ 61941379 (-)
G1888745 NA non-coding downstream 11643 61938645 ~ 61938852 (-)
G1888744 NA non-coding downstream 12234 61937956 ~ 61938261 (-)
G1888716 NA non-coding downstream 47751 61902067 ~ 61902744 (-)
G1888754 NA non-coding upstream 5957 61957139 ~ 61957369 (-)
G1888759 NA non-coding upstream 11043 61962225 ~ 61962724 (-)
G1888782 NA non-coding upstream 17974 61969156 ~ 61969367 (-)
G1888787 NA non-coding upstream 25943 61977125 ~ 61977368 (-)
G1888788 NA non-coding upstream 26603 61977785 ~ 61978019 (-)
G1887761 NA other downstream 799325 61150056 ~ 61151170 (-)
G1887449 NA other downstream 1124705 60774110 ~ 60825790 (-)
G1886838 NA other downstream 1953432 59995384 ~ 59997063 (-)
G1886825 NA other downstream 1983829 59966362 ~ 59966666 (-)
gpr75 gpr75 other downstream 2598625 59346393 ~ 59351909 (-)
G1888836 LOC106562881 other upstream 309655 62260837 ~ 62267505 (-)
LOC110532867 LOC106562881 other upstream 318440 62258118 ~ 62273944 (-)

Expression


Co-expression Network