G1888350


Basic Information

Item Value
gene id G1888350
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62023195 ~ 62025102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160224
tctactgtctactgtacaggtctactgtacaggtctactgtctactgtacaggtctactgtctactgtacaggtctactgtctactgtacaggtctactgtctactgtacaggtctactgtctactgtctactgtacaggtctactgtctactgtacagatctactgtctactgtacaggtctactgtctactgtctactgtacaggtctactgtctactgtacaggtctactgtctactgtacaggtctactgtatCTTACTGGAAATAACACCTGATATTTTGATATAGCAGCTGTCCAAAATGAGTGAGTACATTAAGAGTGTGTCTATGCGTGTGTGTTTCTACATATGTGCGCATGTCCATGCAAATGTACATAaatgtgtctgtccatgtgtgtgtgtgtatgcttgtc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592043

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160224 True 415 lncRNA 0.42 3 62023195 62025102

Neighbor

gene id symbol gene type direction distance location
LOC110516873 LOC105008825 coding upstream 32539 61823465 ~ 61990656 (+)
LOC118943839 LOC106577359 coding upstream 207521 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 402998 61615982 ~ 61620197 (+)
LOC110522442 LOC106577282 coding upstream 408924 61606024 ~ 61614271 (+)
LOC110532895 LOC106577282 coding upstream 447521 61558011 ~ 61575674 (+)
LOC118943931 NA coding downstream 12553 62036002 ~ 62038690 (+)
LOC110531647 LOC106592896 coding downstream 52911 62078013 ~ 62114232 (+)
LOC110516194 LOC106562987 coding downstream 266637 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 318299 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 390558 62415660 ~ 62416166 (+)
G1888354 NA non-coding upstream 6679 62016315 ~ 62016516 (+)
G1888346 NA non-coding upstream 7166 62015599 ~ 62016029 (+)
G1888347 NA non-coding upstream 8687 62013960 ~ 62014508 (+)
G1888336 NA non-coding upstream 10803 62011104 ~ 62012392 (+)
G1888335 LOC106560778 non-coding upstream 12405 62008869 ~ 62010790 (+)
G1888363 NA non-coding downstream 23385 62048487 ~ 62053170 (+)
G1888364 NA non-coding downstream 28256 62053358 ~ 62054049 (+)
G1888366 NA non-coding downstream 32305 62057407 ~ 62057756 (+)
G1888298 NA other upstream 95338 61926746 ~ 61927857 (+)
G1887835 NA other upstream 745432 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1852415 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2235206 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2237100 59749718 ~ 59786095 (+)
G1888544 NA other downstream 539423 62564525 ~ 62565083 (+)

Expression


Co-expression Network