G1888364


Basic Information

Item Value
gene id G1888364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62053358 ~ 62054049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160249
CTTCTTAATATAATTAAATAAATGTGACTGGTCCATCAGTGATCCAGGTATATCAGAAACTACCCTCTGGGGACACTGtcatttcaatgtggataactgggtaatatttggttgagacgttgatcaatgagattacaacctacagtatattcacccactcaaaaagacaaaaagttagttgaattcccaatgtgttttCCCTAtcctttcaaccatctaaaagcacagtTGAGATTACATAAAAAGTACATGGAGCAAGTGATCAATGTCATTCTAGTTCTGACAGATTATAACAGCAAtggtgaagatctccacagacctgtgatGACCTATGCATGTTATCTAGAACATAAAcactttctatgattacataagaagaaatgcatcaacatttaaaggagatgtttctactgcttggatagttccatctgagacaCTGGCTTAATCCCATTCTTTAATTTATATTTTGGGGCGATTTGGGGACACAAATTCATCATCTAATTTATCAACAAGTTAGTAGGCTGTCTATTGTATTTtaaaagtgatattgaattgtgtttggttggcAACGCAACCAAAAATCAACACTTGAAGGAGATGTATATCCTGCAAGTATAGTTCGATCTGTGCCACTGATTTAGTCTGGTAGTAATTCCAGTTTTTCTACAAattaatatgttggattcacatct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160249 True 692 lncRNA 0.35 1 62053358 62054049

Neighbor

gene id symbol gene type direction distance location
LOC118943931 NA coding upstream 14674 62036002 ~ 62038690 (+)
LOC110516873 LOC105008825 coding upstream 62702 61823465 ~ 61990656 (+)
LOC118943839 LOC106577359 coding upstream 237684 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 433161 61615982 ~ 61620197 (+)
LOC110522442 LOC106577282 coding upstream 439087 61606024 ~ 61614271 (+)
LOC110531647 LOC106592896 coding downstream 23964 62078013 ~ 62114232 (+)
LOC110516194 LOC106562987 coding downstream 237690 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 289352 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 361611 62415660 ~ 62416166 (+)
LOC118943940 LOC106563028 coding downstream 371795 62425844 ~ 62471811 (+)
G1888363 NA non-coding upstream 188 62048487 ~ 62053170 (+)
G1888350 NA non-coding upstream 28256 62023195 ~ 62025102 (+)
G1888354 NA non-coding upstream 36842 62016315 ~ 62016516 (+)
G1888346 NA non-coding upstream 37329 62015599 ~ 62016029 (+)
G1888366 NA non-coding downstream 3358 62057407 ~ 62057756 (+)
G1888373 NA non-coding downstream 68708 62122757 ~ 62178580 (+)
G1888374 NA non-coding downstream 73738 62127787 ~ 62129848 (+)
G1888352 NA non-coding downstream 76864 62130913 ~ 62131886 (+)
G1888298 NA other upstream 125501 61926746 ~ 61927857 (+)
G1887835 NA other upstream 775595 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1882578 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2265369 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2267263 59749718 ~ 59786095 (+)
G1888544 NA other downstream 510476 62564525 ~ 62565083 (+)

Expression


Co-expression Network