G1888392


Basic Information

Item Value
gene id G1888392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62158290 ~ 62191187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160304
cctgtacatgaccatctgatcatttatcactccagtgttaatctgcaaacttgtaattatttgcctacctcctcatgccttttgcacacaatgtatatagactccctttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgcaaatgagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160304 True 219 lncRNA 0.39 2 62158290 62191187

Neighbor

gene id symbol gene type direction distance location
LOC110531647 LOC106592896 coding upstream 44058 62078013 ~ 62114232 (+)
LOC118943931 NA coding upstream 119606 62036002 ~ 62038690 (+)
LOC110516873 LOC105008825 coding upstream 167634 61823465 ~ 61990656 (+)
LOC118943839 LOC106577359 coding upstream 342616 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 538093 61615982 ~ 61620197 (+)
LOC110516194 LOC106562987 coding downstream 100552 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 152214 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 224473 62415660 ~ 62416166 (+)
LOC118943940 LOC106563028 coding downstream 234657 62425844 ~ 62471811 (+)
LOC110531772 LOC106569852 coding downstream 290444 62481631 ~ 62483395 (+)
G1888391 NA non-coding upstream 1869 62155921 ~ 62156421 (+)
G1888388 NA non-coding upstream 5876 62151657 ~ 62152414 (+)
G1888376 NA non-coding upstream 25575 62132232 ~ 62132715 (+)
G1888352 NA non-coding upstream 26404 62130913 ~ 62131886 (+)
G1888374 NA non-coding upstream 28442 62127787 ~ 62129848 (+)
G1888403 NA non-coding downstream 2061 62193248 ~ 62194292 (+)
G1888408 NA non-coding downstream 68339 62259526 ~ 62262559 (+)
G1888425 NA non-coding downstream 79408 62270595 ~ 62271591 (+)
G1888427 NA non-coding downstream 83855 62275042 ~ 62275258 (+)
G1888429 NA non-coding downstream 85272 62276459 ~ 62285346 (+)
G1888298 NA other upstream 230433 61926746 ~ 61927857 (+)
G1887835 NA other upstream 880527 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 1987510 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2370301 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2372195 59749718 ~ 59786095 (+)
G1888544 NA other downstream 373338 62564525 ~ 62565083 (+)

Expression


Co-expression Network