G1888403


Basic Information

Item Value
gene id G1888403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62193248 ~ 62194292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160318
ggtgttaatactaccacacatcaacaacagggtttggtactaatactaccacacatcaacaacagggtttggtactaatactaacacacatcaacaacagggtttggtactaatactaccacacatcaacaacagggtttggtgttaatactaccacacatcaacaacagggtttggtactaatactaccacacatcaacaacagggtttggcactaatactaccacacatcattacacatcaacaacagggtttggtactaatactaccagacatcaacaacagggtttggtactaatactaccacacatcaacaacagggtttggtactaatactaccacacatcattacacatcaacaacagggtttggtactaatactaccacacatcattacacatcaacaacagggtttggtactaatactaccacacttcaacaacagggtttggcactaatactaccacacatcattacacatcaacaacagggtttggtactaataataccacacatcattacacatcaacaacagggtttggtactaatactaccacacatcattacacatcaacaacagggtttggtactaatactaccacacatcattacacatcaacaacagggtttggtacgaatactaccacacatcattacacatcaacaacagggtttggtactaatactaccacacttcaacaacagggtttggtactaatactaccacacatcaacaacagggtttggtactaatactaccacacatcaaaacacatcaacaacagggcttggtactaatactaccacacatcaacaacagggtttggcactaatactaccacacatcattacacaccaacaacagggtttggtactaatactaccacacatcaacaacagggtttggtactaatactaccacacatcattacacaccaacaacagggtttggtactaatactaccacacatcattacacatcaacaacagggtctgGTACCAATaatacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160318 True 1010 lncRNA 0.39 2 62193248 62194292

Neighbor

gene id symbol gene type direction distance location
LOC110531647 LOC106592896 coding upstream 79016 62078013 ~ 62114232 (+)
LOC118943931 NA coding upstream 154564 62036002 ~ 62038690 (+)
LOC110516873 LOC105008825 coding upstream 202592 61823465 ~ 61990656 (+)
LOC118943839 LOC106577359 coding upstream 377574 61743749 ~ 61815674 (+)
LOC118943838 LOC106577289 coding upstream 573051 61615982 ~ 61620197 (+)
LOC110516194 LOC106562987 coding downstream 97447 62291739 ~ 62339471 (+)
LOC118936589 LOC106562987 coding downstream 149109 62343401 ~ 62415570 (+)
LOC118943939 NA coding downstream 221368 62415660 ~ 62416166 (+)
LOC118943940 LOC106563028 coding downstream 231552 62425844 ~ 62471811 (+)
LOC110531772 LOC106569852 coding downstream 287339 62481631 ~ 62483395 (+)
G1888392 NA non-coding upstream 2061 62158290 ~ 62191187 (+)
G1888373 NA non-coding upstream 14668 62122757 ~ 62178580 (+)
G1888391 NA non-coding upstream 36827 62155921 ~ 62156421 (+)
G1888388 NA non-coding upstream 40834 62151657 ~ 62152414 (+)
G1888376 NA non-coding upstream 60533 62132232 ~ 62132715 (+)
G1888408 NA non-coding downstream 65234 62259526 ~ 62262559 (+)
G1888425 NA non-coding downstream 76303 62270595 ~ 62271591 (+)
G1888427 NA non-coding downstream 80750 62275042 ~ 62275258 (+)
G1888429 NA non-coding downstream 82167 62276459 ~ 62285346 (+)
G1888450 NA non-coding downstream 108355 62302647 ~ 62303241 (+)
G1888298 NA other upstream 265391 61926746 ~ 61927857 (+)
G1887835 NA other upstream 915485 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 2022468 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2405259 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2407153 59749718 ~ 59786095 (+)
G1888544 NA other downstream 370233 62564525 ~ 62565083 (+)

Expression


Co-expression Network