Gene
RNA
| Item | Value |
|---|---|
| gene id | G1888907 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 62397468 ~ 62398248 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2160974 | False | 291 | lncRNA | 0.55 | 3 | 62397468 | 62398248 |
| TU2160977 | False | 242 | lncRNA | 0.55 | 3 | 62397468 | 62398248 |
| TU2160975 | True | 227 | lncRNA | 0.55 | 2 | 62397679 | 62398248 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943938 | LOC106577312 | coding | downstream | 104447 | 62276439 ~ 62310445 (-) |
| LOC110532867 | LOC106562881 | coding | downstream | 123524 | 62258118 ~ 62273944 (-) |
| LOC118943937 | NA | coding | downstream | 135130 | 62259487 ~ 62262338 (-) |
| LOC118943933 | LOC106592896 | coding | downstream | 154764 | 62220901 ~ 62242704 (-) |
| LOC118943936 | LOC106562881 | coding | downstream | 187786 | 62207261 ~ 62209682 (-) |
| LOC118943941 | LOC105008298 | coding | upstream | 93633 | 62491881 ~ 62560536 (-) |
| LOC118936590 | LOC106577388 | coding | upstream | 162430 | 62560678 ~ 62570675 (-) |
| LOC118943942 | LOC106577315 | coding | upstream | 371787 | 62770035 ~ 62776655 (-) |
| LOC118943943 | LOC102782193 | coding | upstream | 382851 | 62781099 ~ 62876729 (-) |
| G1888893 | NA | non-coding | downstream | 16361 | 62379687 ~ 62381107 (-) |
| G1888879 | NA | non-coding | downstream | 49527 | 62347247 ~ 62347941 (-) |
| G1888862 | NA | non-coding | downstream | 80514 | 62316606 ~ 62316954 (-) |
| G1888913 | NA | non-coding | upstream | 8953 | 62407201 ~ 62407850 (-) |
| G1888885 | NA | non-coding | upstream | 13257 | 62411505 ~ 62415605 (-) |
| G1888918 | NA | non-coding | upstream | 22300 | 62420548 ~ 62420758 (-) |
| G1888945 | LOC106569852 | non-coding | upstream | 83477 | 62481725 ~ 62484288 (-) |
| G1888948 | NA | non-coding | upstream | 96893 | 62495141 ~ 62495611 (-) |
| G1888836 | LOC106562881 | other | downstream | 129963 | 62260837 ~ 62267505 (-) |
| LOC118943840 | NA | other | downstream | 235079 | 62152136 ~ 62164324 (-) |
| G1887761 | NA | other | downstream | 1246298 | 61150056 ~ 61151170 (-) |
| G1887449 | NA | other | downstream | 1571678 | 60774110 ~ 60825790 (-) |
