G1888491


Basic Information

Item Value
gene id G1888491
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62417326 ~ 62417948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2160436
CTCAGTCAGGTGGAGTCACATGCATGGTTCTATGTGAAATGGGGAGAGAGGCAAGGggggagagaaataaagagagatggagaggaagagagtaaCAGAGGGACTGAGAAAGAGAAGGTGTGATCTTATTGCATTGAGAGGGTCATTGTGTTCTCCTCCAGTCTATGGCACCCTATAGATACTTGCTGGCTGCAAATATATGCGTGCCTCTATGGGGGTTAGGCCTGCCCTTATTGAGCTCTATGGGGGTTAGGCCTGCCCTTATTGAGCTCTATGCGGGTTAGACCTGCCcttatttttttcaatttaaagttatattaagttttcttgtttttcaatcaaccaacaaaacacattccacattcacagatgtgacaggctttaaaaaaattaaaaataaaaaaataataatacttttgaaaaaataaaaatacaattaaaatgaatgataaagtcaaataaaagcatttatttttcttaatctatatattttccttggtacatatatatatacatacatacatacgtacgtacatacatacgcacatatacatacacacacacacacatacgcacacgtactcaaaaacgaaattaaaataaaaacacacacaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2160436 True 623 lncRNA 0.35 1 62417326 62417948

Neighbor

gene id symbol gene type direction distance location
LOC118943939 NA coding upstream 1161 62415660 ~ 62416166 (+)
LOC118936589 LOC106562987 coding upstream 2904 62343401 ~ 62415570 (+)
LOC110516194 LOC106562987 coding upstream 77855 62291739 ~ 62339471 (+)
LOC110531647 LOC106592896 coding upstream 303094 62078013 ~ 62114232 (+)
LOC118943931 NA coding upstream 378642 62036002 ~ 62038690 (+)
LOC118943940 LOC106563028 coding downstream 7896 62425844 ~ 62471811 (+)
LOC110531772 LOC106569852 coding downstream 63683 62481631 ~ 62483395 (+)
LOC118936402 LOC106591852 coding downstream 159216 62577164 ~ 62761951 (+)
G1888490 NA non-coding upstream 131 62416948 ~ 62417195 (+)
G1888479 NA non-coding upstream 25517 62389453 ~ 62391809 (+)
G1888477 NA non-coding upstream 28684 62388244 ~ 62388642 (+)
G1888492 NA non-coding downstream 123 62418071 ~ 62418430 (+)
G1888493 NA non-coding downstream 2121 62420069 ~ 62420439 (+)
G1888496 NA non-coding downstream 7199 62425147 ~ 62425370 (+)
G1888500 NA non-coding downstream 69438 62487386 ~ 62489250 (+)
G1888499 NA non-coding downstream 71745 62489693 ~ 62492443 (+)
G1888298 NA other upstream 489469 61926746 ~ 61927857 (+)
G1887835 NA other upstream 1139563 61276775 ~ 61277763 (+)
slc35f3b slc35f3 other upstream 2246546 60012705 ~ 60174129 (+)
G1886561 NA other upstream 2629337 59783986 ~ 59787989 (+)
G1886560 NA other upstream 2631231 59749718 ~ 59786095 (+)
G1888544 NA other downstream 146577 62564525 ~ 62565083 (+)

Expression


Co-expression Network