G1889133


Basic Information

Item Value
gene id G1889133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 62717258 ~ 62717648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2161243
ctggttactggcccaacgctctaaccactaggctacctgctggttactggcccaacgctctaaccactaggctacctgctggttactggcccaacgctctaaccactaggctacctgctggttactggcccaacgctcaaaccactaggctacctgctggttactggcccaacactctaaccactaggctacctgctggttactggcccaacactctaaccactaggctacctgctggttactggcccaacactctaaccactaggctacctgc

Function

NR:

description
membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2161243 True 274 lncRNA 0.55 2 62717258 62717648

Neighbor

gene id symbol gene type direction distance location
LOC118936590 LOC106577388 coding downstream 146583 62560678 ~ 62570675 (-)
LOC118943941 LOC105008298 coding downstream 156722 62491881 ~ 62560536 (-)
LOC118943938 LOC106577312 coding downstream 424237 62276439 ~ 62310445 (-)
LOC110532867 LOC106562881 coding downstream 443314 62258118 ~ 62273944 (-)
LOC118943942 LOC106577315 coding upstream 52387 62770035 ~ 62776655 (-)
LOC118943943 LOC102782193 coding upstream 63451 62781099 ~ 62876729 (-)
G1889127 LOC106591852 non-coding downstream 24315 62692528 ~ 62692943 (-)
G1889120 NA non-coding downstream 46720 62667515 ~ 62670538 (-)
G1889121 NA non-coding downstream 47561 62668820 ~ 62669697 (-)
G1888973 NA non-coding downstream 140315 62576700 ~ 62576943 (-)
G1888968 NA non-coding downstream 164773 62547641 ~ 62552485 (-)
G1888836 LOC106562881 other downstream 449753 62260837 ~ 62267505 (-)
LOC118943840 NA other downstream 554869 62152136 ~ 62164324 (-)
G1887761 NA other downstream 1566088 61150056 ~ 61151170 (-)
G1887449 NA other downstream 1891468 60774110 ~ 60825790 (-)

Expression


Co-expression Network