Gene
RNA
| Item | Value |
|---|---|
| gene id | trnastop-uca-3 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 3234183 ~ 3292316 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnastop-uca-3 | False | 87 | mRNA | 0.62 | 1 | 3292230 | 3292316 |
| TU2165511 | True | 202 | lncRNA | 0.44 | 2 | 3234183 | 3292305 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnastop-uca-2 | NA | coding | downstream | 10068 | 3282076 ~ 3282162 (-) |
| trnastop-uca | NA | coding | downstream | 10711 | 3281433 ~ 3281519 (-) |
| LOC110503509 | NA | coding | downstream | 11172 | 3278291 ~ 3281058 (-) |
| LOC110503563 | LOC106612495 | coding | downstream | 103556 | 3179587 ~ 3188674 (-) |
| LOC110503562 | LOC106612510 | coding | downstream | 112703 | 3177212 ~ 3179527 (-) |
| LOC110503508 | LOC106612386 | coding | upstream | 3378 | 3295694 ~ 3300801 (-) |
| LOC110503507 | ppp1r37 | coding | upstream | 17961 | 3310277 ~ 3365892 (-) |
| LOC110503302 | LOC106612383 | coding | upstream | 107419 | 3399735 ~ 3412144 (-) |
| LOC110503506 | gemin7 | coding | upstream | 137811 | 3430127 ~ 3432826 (-) |
| LOC110503301 | ptgir | coding | upstream | 306823 | 3599139 ~ 3642485 (-) |
| G1892988 | NA | non-coding | downstream | 43912 | 3206745 ~ 3248318 (-) |
| G1892985 | NA | non-coding | downstream | 57196 | 3227516 ~ 3235034 (-) |
| G1892984 | NA | non-coding | downstream | 92926 | 3199070 ~ 3199304 (-) |
| G1892980 | NA | non-coding | downstream | 95673 | 3196329 ~ 3196557 (-) |
| G1892973 | NA | non-coding | downstream | 108857 | 3183113 ~ 3183373 (-) |
| G1893104 | NA | non-coding | upstream | 141350 | 3433666 ~ 3433881 (-) |
| G1893105 | NA | non-coding | upstream | 144613 | 3436929 ~ 3437152 (-) |
| G1893116 | NA | non-coding | upstream | 153492 | 3445808 ~ 3446048 (-) |
| G1893122 | NA | non-coding | upstream | 158821 | 3451137 ~ 3451356 (-) |
| G1893167 | NA | non-coding | upstream | 163723 | 3456039 ~ 3510646 (-) |
| G1892888 | NA | other | downstream | 272789 | 3013455 ~ 3019441 (-) |
| G1892841 | NA | other | downstream | 355179 | 2936184 ~ 2937051 (-) |
| G1891499 | NA | other | downstream | 1487168 | 1802008 ~ 1805430 (-) |
| LOC110503527 | med29 | other | downstream | 2201240 | 1087227 ~ 1091024 (-) |
| G1889857 | NA | other | downstream | 2733131 | 557130 ~ 559099 (-) |
| G1893790 | LOC106612372 | other | upstream | 618393 | 3881288 ~ 3914848 (-) |
| egln2 | egln2 | other | upstream | 761519 | 4053778 ~ 4075685 (-) |
| si:dkey-202l22.3 | LOC106612399 | other | upstream | 999533 | 4289886 ~ 4294714 (-) |
| G1894611 | NA | other | upstream | 1061262 | 4353578 ~ 4353936 (-) |
| G1896030 | NA | other | upstream | 2576580 | 5868896 ~ 5869218 (-) |
| map3k10 | map3k10 | coding | downstream | 166077 | 3023415 ~ 3068106 (-) |
| LOC118944109 | NA | coding | downstream | 509148 | 2722947 ~ 2725035 (-) |
| gfm1 | gfm1 | coding | downstream | 535175 | 2686141 ~ 2699008 (-) |
| G1892970 | NA | non-coding | downstream | 60221 | 3170898 ~ 3173962 (-) |
