Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944008 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 4304011 ~ 4304884 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039296.1 | True | 572 | mRNA | 0.51 | 3 | 4304011 | 4304884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-202l22.3 | LOC106612399 | coding | downstream | 9297 | 4289886 ~ 4294714 (-) |
| LOC110503493 | LOC107566082 | coding | downstream | 127126 | 4174020 ~ 4176885 (-) |
| egln2 | egln2 | coding | downstream | 228326 | 4053778 ~ 4075685 (-) |
| LOC118944023 | tmem160 | coding | downstream | 266958 | 4032914 ~ 4037053 (-) |
| LOC110503499 | ap2s1 | coding | downstream | 492983 | 3805042 ~ 3811028 (-) |
| LOC110503487 | dscaml1 | coding | upstream | 36969 | 4341853 ~ 4637877 (-) |
| LOC110503567 | NA | coding | upstream | 373892 | 4678776 ~ 4691209 (-) |
| LOC110503569 | LOC106612728 | coding | upstream | 392549 | 4697433 ~ 4714061 (-) |
| LOC110503570 | scn4b | coding | upstream | 458852 | 4763066 ~ 4788688 (-) |
| LOC110503572 | scn2b | coding | upstream | 492310 | 4797194 ~ 4820066 (-) |
| G1894004 | NA | non-coding | downstream | 15901 | 4287566 ~ 4288110 (-) |
| G1894000 | NA | non-coding | downstream | 23540 | 4280264 ~ 4280471 (-) |
| G1893999 | NA | non-coding | downstream | 23981 | 4279822 ~ 4280030 (-) |
| G1893998 | NA | non-coding | downstream | 25043 | 4278714 ~ 4278968 (-) |
| G1894033 | NA | non-coding | upstream | 29489 | 4334373 ~ 4334730 (-) |
| G1894035 | NA | non-coding | upstream | 31357 | 4336241 ~ 4336457 (-) |
| G1894612 | NA | non-coding | upstream | 54707 | 4359591 ~ 4369050 (-) |
| G1894617 | NA | non-coding | upstream | 77845 | 4382729 ~ 4383202 (-) |
| G1893790 | LOC106612372 | other | downstream | 389163 | 3881288 ~ 3914848 (-) |
| G1892888 | NA | other | downstream | 1284570 | 3013455 ~ 3019441 (-) |
| G1892841 | NA | other | downstream | 1366960 | 2936184 ~ 2937051 (-) |
| G1894611 | NA | other | upstream | 48694 | 4353578 ~ 4353936 (-) |
| G1896030 | NA | other | upstream | 1564012 | 5868896 ~ 5869218 (-) |
| LOC118944082 | NA | other | upstream | 1877528 | 6181377 ~ 6231808 (-) |
| LOC110503590 | LOC106612705 | other | upstream | 2153637 | 6371958 ~ 6472758 (-) |
| G1899875 | NA | other | upstream | 3741895 | 8046779 ~ 8047974 (-) |
