il10r1 (il10r1)


Basic Information

Item Value
gene id il10r1
gene name il10r1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 4722639 ~ 4726930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001281374.1
ATCATGTCAACTATTAACTGTAGCTTGAGTAAAGCCTCTCCGATCATAACGTAGGAGTCCAACTGAGCCTTCCCGTCTCCTGTCGTCAGAGAGAAGGCTGAGCTGATGAGGGACGCCAGACGTGTGCTGACATCATCTACAGTAGTATGACCCTGGTTATCTGAGAACCAAAAAATACTTTGGAAATGGATTGGACCTTTTGGATTTCCATTCTCCTGGTCATCTCAGACTGTGTGTCAGGTGAAGACCTACTGATGATGCCAGTCAATCTGATGGTGGACATATGGGACGGGGAGGTGACGTTGCTCTGGGAGCCCCCTGAAGGGGCCCCGCCACTGGCTCAGTACCAGGTGCAGATGGCCAGGTATGGCAATATTAATTGGACCAACGTGACCAGCTGTGACAGGACCCAGCTGACATATTGTGACCTGTCCTACCTTATCGATGACTTCTTCATGGTCTACAAGGTCCGGGTCCGACTGGTCACCGAGAACAACGTCTCTGAATGGTCACGGTCGAAGAAGTTCAACCCCAGAGAAAGTAAACTGCAGCATCCCTCCAGTACGCTGTTGGCCACCTCCAGCTCAGTAACAGTCCGTGTTCACAGGAAGCCATTACTTAAAAAGATCTTCCCATATGGCCTTACTTACACTATCTACCTACAGGGAAAAGGTCAGGGCCAGAAgACCGTCATCCGGCATTTGAAGGACGAAGACGACGAGGATAAGGCGGAGGTTCGGTTTGGGTCTCTTGACTGGGGACAGGAGTACTGTGTCAGCCTCAAAGTCGCAGGCAACGGAGGAGAATTCACCAGTGAGCTCTCCCCTGAACAGTGCCTCCTGCTGCCGGAGCAAGAGTGGTATATCCTTGCTGTGGTGTCCTTCTCCATCCTAAGTGTGACGGGGGTCCTGGTCATCCTGTCCCTTTGCCTTTGCTACTTCCTGAGGCGCCCTGAGAAAATTCCTGTTGCACTGAAATCCACAGGCAGCGGCTGGCAGCCTCTCTGTGTGGGAAACGACCCAGTGGAGATAGTCACAGACAAAGGCTGGTTCATGAACACTGCCAGAATTGATGCCATGGTCTGGTTGGCTGACGAGAGGTCAACTACAGCAGGCAAGGGAGagcaggaagaaggagaggacagaagagcgGGTCTGGACAGTGGGGCCTGCACCGAATCACACATTTCTGGGAATGGAAATGGAGGGAGTGTGGCAAAGCAAGAAGACAGTGGCTGTGGAAGCCTGGGAGCACCAGAGAGTGCCATCAGCAGCAGGAGTGGAACTGGAGAGCCACCCCTGCTGGATGGGAAGACAAACACCGACATCGACCTGAAAGAGGACAGTGGGGTGGGGATGGGCTGCCAGTTAGGGTGTGCTGGAAGTCTACAGGGGGACTGTGAAATCTTGCCTGAGATGGTAATGGTCACAGGGGGTGGCTACCAGAGCCAGAGTCCCTCTTCGGTGGACGCCCATGTTGTTGAGACAGAGCAGAGTTTTCAACAAATCTCATGCGAAACAGTTATGGCTGATCCTGTTGTGGGATACAGGTCTGGTCACGTGGCATGCGTTTGTTTAGGGGCAAGCCAATGTGTTTGGTGCCAGACAAGAAGACACAATGAGAGGAGTGTCGATGGACAGTCTGTACCCCTGTTTAGTTTGACAGAGGAGCAGCTAAACTGCAGCAATCTCACAGGAGACATGTGTGAGATGGAATCTACAAGCTCTAGTTATAAAAATAACAATCTCCACATAGACACAGTGGTAAACTTGGAGGACTCAGTAACCTTTTCCTACCTGCCTACATGCATAGGGGAATCCTTCCCGCTCCTGGCAGCTTTATCAGAGTTACCCCTAGCGGAGGGAGGACTGAACTGCAGCGTGAACACTATGCCTCCTTCTCTTGGTGATTTGGAAGTGATATTTGATTGACAAGGTCCACAAACGGAGGACactgtgagacacacacacacaagggtttGTTTAGCACTCTAGACTGCGGGGAGTCATGCAATATGTCTACACACCCTTTTTATGTAATTTCAAGTAAACACTCCTTTTCCTAACTGAAAAGATCAGCAATCCTAATTCTATTTGTGGCTATTTAAGTATTTTTGGAGCTTTTTGGCATCGGTCCTCAGATCCTTAATTAAAAAGATCTACAGCggcactatcgagagcatcctgactggttgcattacCCCcgggtatggaaactgctcggtctccgaccgcaaggcactacagagggtagagcaTATGGCCCAGTAtaccactggggccaagcttcctgccatccaggacttctatgcgaggcggtgacagaggaaggcccaaaaaattgccaaagactccagctactctagtcattgactgttctctccgggaactctacctacatgtacatattaccttaattacccagactaaccggtaccccctgtatttagcctcgctactgttattttattgttgctcctttaATTATTTTTTGTTTGTATACTTTTTTTCATCTTCATTTAAAAATGTCCTTTTAGAAGTCATTTTAGTAAACACTTTCTTGAACacttttttcttaaaactgcattgttggttaagggcttgtcagtaagcatttcactgtaaggtctacctatacctgttgtatttggtgggtgtgacaaataaaatgttattttggaGAGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001281374.1 True 2685 mRNA 0.49 7 4722639 4726930
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944093 NA coding upstream 382115 4336602 ~ 4341404 (+)
LOC110503491 LOC106612400 coding upstream 444485 4267530 ~ 4278154 (+)
LOC110503492 prkd2 coding upstream 461128 4200946 ~ 4261511 (+)
LOC110503494 strn4 coding upstream 526106 4176229 ~ 4196533 (+)
LOC110503495 slc1a5 coding upstream 552290 4158455 ~ 4170349 (+)
tmprss4a LOC106612727 coding downstream 16703 4743633 ~ 4762831 (+)
LOC118944078 NA coding downstream 657528 5384458 ~ 5387799 (+)
LOC118944106 NA coding downstream 704529 5431459 ~ 5448034 (+)
zgc:162730 tisb coding downstream 728831 5455761 ~ 5458351 (+)
bl1s3 bl1s3 coding downstream 792061 5518991 ~ 5520163 (+)
G1894175 NA non-coding upstream 40948 4679975 ~ 4681691 (+)
G1894166 LOC106612730 non-coding upstream 47006 4671136 ~ 4675633 (+)
G1894119 NA non-coding upstream 136176 4586063 ~ 4586463 (+)
G1894114 NA non-coding upstream 144095 4578199 ~ 4578544 (+)
G1894113 NA non-coding upstream 146736 4575683 ~ 4575903 (+)
G1894202 NA non-coding downstream 8545 4735475 ~ 4736220 (+)
G1894207 NA non-coding downstream 36137 4763067 ~ 4766750 (+)
G1894541 NA non-coding downstream 532901 5259831 ~ 5260518 (+)
G1895178 NA non-coding downstream 647090 5374020 ~ 5374256 (+)
G1895196 NA non-coding downstream 671505 5398435 ~ 5398652 (+)
G1894083 LOC106612398 other upstream 277663 4444623 ~ 4444976 (+)
G1893604 NA other upstream 432041 4289908 ~ 4290598 (+)
G1892702 NA other upstream 1420049 3270196 ~ 3302590 (+)
sipa1l3 sipa1l3 other upstream 1588916 3075396 ~ 3173993 (+)
G1895266 LOC106612719 other downstream 794485 5521415 ~ 5522865 (+)
G1896894 NA other downstream 2213486 6940416 ~ 6941556 (+)
G1896931 NA other downstream 2290865 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 2590022 7316925 ~ 7350759 (+)

Expression

il10r1(il10r1) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 6.
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il10r1(il10r1) Expression in each Bioproject

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il10r1(il10r1) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network