Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944106 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 5431459 ~ 5448034 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039423.1 | True | 535 | mRNA | 0.43 | 3 | 5431459 | 5448034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944078 | NA | coding | upstream | 43660 | 5384458 ~ 5387799 (+) |
| tmprss4a | LOC106612727 | coding | upstream | 668628 | 4743633 ~ 4762831 (+) |
| il10r1 | il10r1 | coding | upstream | 704529 | 4722639 ~ 4726930 (+) |
| LOC118944093 | NA | coding | upstream | 1090935 | 4336602 ~ 4341404 (+) |
| LOC110503491 | LOC106612400 | coding | upstream | 1153305 | 4267530 ~ 4278154 (+) |
| zgc:162730 | tisb | coding | downstream | 7727 | 5455761 ~ 5458351 (+) |
| bl1s3 | bl1s3 | coding | downstream | 70957 | 5518991 ~ 5520163 (+) |
| LOC110503581 | LOC106612717 | coding | downstream | 426451 | 5874485 ~ 6033122 (+) |
| LOC110503583 | LOC106612716 | coding | downstream | 625553 | 6073587 ~ 6076625 (+) |
| LOC110503584 | NA | coding | downstream | 694369 | 6142403 ~ 6143853 (+) |
| G1895213 | NA | non-coding | upstream | 11032 | 5419766 ~ 5420427 (+) |
| G1895204 | NA | non-coding | upstream | 22467 | 5408768 ~ 5408992 (+) |
| G1895197 | NA | non-coding | upstream | 31754 | 5399484 ~ 5399705 (+) |
| G1895196 | NA | non-coding | upstream | 32807 | 5398435 ~ 5398652 (+) |
| G1895178 | NA | non-coding | upstream | 57203 | 5374020 ~ 5374256 (+) |
| G1895226 | NA | non-coding | downstream | 931 | 5448965 ~ 5449202 (+) |
| G1895268 | NA | non-coding | downstream | 76821 | 5524855 ~ 5525161 (+) |
| G1895270 | NA | non-coding | downstream | 78847 | 5526881 ~ 5527106 (+) |
| G1895292 | NA | non-coding | downstream | 113260 | 5561294 ~ 5561579 (+) |
| G1895294 | NA | non-coding | downstream | 114152 | 5562186 ~ 5562508 (+) |
| G1894083 | LOC106612398 | other | upstream | 986483 | 4444623 ~ 4444976 (+) |
| G1893604 | NA | other | upstream | 1140861 | 4289908 ~ 4290598 (+) |
| G1892702 | NA | other | upstream | 2128869 | 3270196 ~ 3302590 (+) |
| sipa1l3 | sipa1l3 | other | upstream | 2297736 | 3075396 ~ 3173993 (+) |
| G1895266 | LOC106612719 | other | downstream | 73381 | 5521415 ~ 5522865 (+) |
| G1896894 | NA | other | downstream | 1492382 | 6940416 ~ 6941556 (+) |
| G1896931 | NA | other | downstream | 1569761 | 7017795 ~ 7018558 (+) |
| LOC110503629 | LOC106612674 | other | downstream | 1868918 | 7316925 ~ 7350759 (+) |
