zgc:162730 (tisb)


Basic Information

Item Value
gene id zgc:162730
gene name tisb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 5455761 ~ 5458351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581976.2
CAGGAAACCCCGCCTGCCTGCAGCCCAGACACAATCGCCCGTGTCTTGCAGCTGAAAGTGACAGGCGAACTGAAACGTTTCAAAGGACAAGAACACGTAGAAGCATGTCCGATATGATCGACGATATTATCACGAGGAATCTGATCAATCTTGGTTTAGATGAACCATTCATCCAGCAACAAATTCAACCAATGGCACCTCGTCTCAACAGTTCAACTTCGTTCTTCTCACCAAAGAGACATAGTCTAAGCTCTGAGCAACTGAACGATGATACCCCCTGGCCACTTGACATTTGGAGCAAGATGGCTCCAAGTAAACAACAAGTTTCCTTCAGACCTGACCGCTCCATGAGTCTAACCGAATCCAATATCCTCTCCTTCGGTAAAATGAAGACCCTGGATGAAGTGCCTCCACCGCCTGGATTTCCTCCCCTGAACAACCCTACACCTCTCCCTTCCAACCGTTACAAAACCGAACTGTGCCGTAGCTTCCAGGAGAACGGAAGCTGTAAATATGGGAGCAAGTGTCAGTTTGCCCATGGAGAGCCTGAGCTGCGCGGTTTGTACAGGCACCCAAAATACAAAACGGAGGCCTGTCGCACCTTTTACAACTTTGGCTACTGCCCATATGGAGCCCGCTGTCACTTCATTCACGAAGAGAAACTCACCCCCTTGACCCAAAAGTTCCACAACCAAGCACTTGCTGATCAGAACCCACGTCAGCTCCGTCAGAGCGTCAGTTTCGCAGGTTTCATGGGATCACGCAGCTCTCCTCCCCCTGCGCTCCACGACCCCCTTGGCTTCACCCGTGCGCCCTCGGTGTCACCACCCCCTGCGGACATTCTCTCCCCAGTGTTCAATGACACCCAACGCAGCACATTTCAGTTTTGTCAGAGCCGACCCAGTGTTGGTGACATCCACAACATCCCTATGATAGTTGAGCCACAGAAGCCCTCACGCTGCGTTTGTGGCCACGGAAATAACTTCCCAAACACTCTGAACAAATCTTACGCTATGGAGGACCGCAACAATGTCTACATCACCCAGCCAAACCTCCAGCGCTTCTCTTCTGAAGATTCCCTCTCAGATCGGGATAGTTACACCAGCACAGGCAGCACCAGCGGGTCAGAGTCCCCCACCTTTGATGGGGCTGGCAACAAGCGCCTCACCGTCTTTGCGCGACTGTCACTCTCTGACTAGGCACCCAAACCACACAGAGACAATCCAAATCACGAACCTCGATCAATTGTGAAGGTTCTGCTTACAGAAATCAGAAATCCTATCAATATGATGCGCATCAACACTTTATACTGTTGTTTATTTATTAGTAGATTACTTGCTCAGTGAAATTTATTTGGTACTCAAACTTATCAAAatctgtatatttttttatacttaTGTATATTTTCATTTAACTTTTCATCTTGTCTTCCATTAATTACTTTCTTTAAAAATGACCTTGATGGTTATGACAGTAACAGACGTTTTAAGTGCCTTTACCTGTCTCAATCAATATGAGAAGGGCCTAGTAGCCTTACTTTAGCTGGATTACTTCGATTAGTCCTTCAAATATATGATCATATGAAACAAAAGACTCCCCTCCATTTAGTAAGCTGCCAGAACTATTTGTCAGATCTGTTCATACTGTTGGTATTCATGTGTATACCAAAAAAACTGTTGAAAATATTCAAACCATCAATGTGACTTGAAAAATGACAAGACATTCTCTCACTGTGATATGCACTTTAAAATAGGTATTGGGAGACTAGTCTCTCTATGTAGCATTTAACCAAAGCTTTATACTTACTTTTTTACACTTGCTACATTCTTTGTGTAAGAGCAGTTTTTCcatttatttgtaattttttgGGGGGCGTCCATCATATTTTAACACATCTGTGACAAAAGTGAGAAGGTGCTAGTACGCCGTCTGTGTATGTCACAGATCTAGGAGGGGGTATTTGTGTAGCCTTTGCCATTTATTGAGAGAcctgttttgttccataatgtttTGACAACCCTGGTTGGGTCTTTACTCAACTGTAGTAGGTGACTTCTATttcatcagggactgtaacatcaCAGTATTTCCATAGACGATCGGTTGACTTATTTGCCTTTTTGTAATTGTATAGACTTAACTAATATATTTATTATGATATTTATTGTGTTAATACCAATGCATTTTGTACTTATTTATCAAGAACATGTCAGGGTCTGTGAAAACGATGTGTGAATTATTAAGAAAAAAAGTATGAATTTATTTTTTTGATCGCCTGAACAGGAGAAATAAATGAAAATGATAAAGAAATGTAA

Function

symbol description
tisb small toxic protein TisB

NR:

description
mRNA decay activator protein ZFP36-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581976.2 True 2315 mRNA 0.43 2 5455761 5458351
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944106 NA coding upstream 7727 5431459 ~ 5448034 (+)
LOC118944078 NA coding upstream 67962 5384458 ~ 5387799 (+)
tmprss4a LOC106612727 coding upstream 692930 4743633 ~ 4762831 (+)
il10r1 il10r1 coding upstream 728831 4722639 ~ 4726930 (+)
LOC118944093 NA coding upstream 1115237 4336602 ~ 4341404 (+)
bl1s3 bl1s3 coding downstream 60640 5518991 ~ 5520163 (+)
LOC110503581 LOC106612717 coding downstream 416134 5874485 ~ 6033122 (+)
LOC110503583 LOC106612716 coding downstream 615236 6073587 ~ 6076625 (+)
LOC110503584 NA coding downstream 684052 6142403 ~ 6143853 (+)
LOC118944026 NA coding downstream 698489 6156840 ~ 6169793 (+)
G1895226 NA non-coding upstream 6559 5448965 ~ 5449202 (+)
G1895213 NA non-coding upstream 35334 5419766 ~ 5420427 (+)
G1895204 NA non-coding upstream 46769 5408768 ~ 5408992 (+)
G1895197 NA non-coding upstream 56056 5399484 ~ 5399705 (+)
G1895196 NA non-coding upstream 57109 5398435 ~ 5398652 (+)
G1895268 NA non-coding downstream 66504 5524855 ~ 5525161 (+)
G1895270 NA non-coding downstream 68530 5526881 ~ 5527106 (+)
G1895292 NA non-coding downstream 102943 5561294 ~ 5561579 (+)
G1895294 NA non-coding downstream 103835 5562186 ~ 5562508 (+)
G1895526 NA non-coding downstream 173927 5632278 ~ 5632826 (+)
G1894083 LOC106612398 other upstream 1010785 4444623 ~ 4444976 (+)
G1893604 NA other upstream 1165163 4289908 ~ 4290598 (+)
G1892702 NA other upstream 2153171 3270196 ~ 3302590 (+)
sipa1l3 sipa1l3 other upstream 2322038 3075396 ~ 3173993 (+)
G1895266 LOC106612719 other downstream 63064 5521415 ~ 5522865 (+)
G1896894 NA other downstream 1482065 6940416 ~ 6941556 (+)
G1896931 NA other downstream 1559444 7017795 ~ 7018558 (+)
LOC110503629 LOC106612674 other downstream 1858601 7316925 ~ 7350759 (+)

Expression

zgc:162730(tisb) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 125.
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zgc:162730(tisb) Expression in each Bioproject

Bar chart with 21 bars.
zgc:162730(tisb) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3000.
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Co-expression Network