Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503584 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 6142403 ~ 6143853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: telomere length regulation protein TEL2 homolog isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470495.2 | True | 864 | mRNA | 0.50 | 4 | 6142403 | 6143853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503583 | LOC106612716 | coding | upstream | 65778 | 6073587 ~ 6076625 (+) |
| LOC110503581 | LOC106612717 | coding | upstream | 109281 | 5874485 ~ 6033122 (+) |
| bl1s3 | bl1s3 | coding | upstream | 622240 | 5518991 ~ 5520163 (+) |
| zgc:162730 | tisb | coding | upstream | 684052 | 5455761 ~ 5458351 (+) |
| LOC118944106 | NA | coding | upstream | 694369 | 5431459 ~ 5448034 (+) |
| LOC118944026 | NA | coding | downstream | 12987 | 6156840 ~ 6169793 (+) |
| LOC110503587 | LOC106612711 | coding | downstream | 141865 | 6285718 ~ 6356497 (+) |
| LOC110503588 | LOC106612710 | coding | downstream | 219204 | 6363057 ~ 6369858 (+) |
| LOC110503591 | LOC106612705 | coding | downstream | 313957 | 6457810 ~ 6460870 (+) |
| sertad3 | LOC106612704 | coding | downstream | 317913 | 6461766 ~ 6463828 (+) |
| G1896003 | NA | non-coding | upstream | 78421 | 6063747 ~ 6063982 (+) |
| G1895996 | NA | non-coding | upstream | 84866 | 6056644 ~ 6057537 (+) |
| G1895853 | NA | non-coding | upstream | 198665 | 5869715 ~ 5943738 (+) |
| G1895806 | NA | non-coding | upstream | 318558 | 5823638 ~ 5823845 (+) |
| G1896397 | NA | non-coding | downstream | 213418 | 6357271 ~ 6357486 (+) |
| G1896364 | NA | non-coding | downstream | 226286 | 6370139 ~ 6370333 (+) |
| G1896363 | NA | non-coding | downstream | 228092 | 6371945 ~ 6374057 (+) |
| G1896402 | LOC106612709 | non-coding | downstream | 231972 | 6375825 ~ 6376095 (+) |
| G1896403 | shkbp1 | non-coding | downstream | 232425 | 6376278 ~ 6377223 (+) |
| G1895266 | LOC106612719 | other | upstream | 619538 | 5521415 ~ 5522865 (+) |
| G1894083 | LOC106612398 | other | upstream | 1697427 | 4444623 ~ 4444976 (+) |
| LOC118944093 | NA | other | upstream | 1800999 | 4336602 ~ 4341404 (+) |
| G1893604 | NA | other | upstream | 1851805 | 4289908 ~ 4290598 (+) |
| G1896894 | NA | other | downstream | 796563 | 6940416 ~ 6941556 (+) |
| G1896931 | NA | other | downstream | 873942 | 7017795 ~ 7018558 (+) |
| LOC110503629 | LOC106612674 | other | downstream | 1173099 | 7316925 ~ 7350759 (+) |
| LOC118944073 | LOC106612646 | other | downstream | 1932353 | 8076117 ~ 8080686 (+) |
| G1898300 | NA | other | downstream | 3213198 | 9357051 ~ 9359164 (+) |
