LOC110503624


Basic Information

Item Value
gene id LOC110503624
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7158014 ~ 7184067 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962039.1
TGGACaagtaacaagtacttttggatgTGAGGGAAAaaatatggagtaaaaagtttattttttctttaggaatgtaagtactttacaccactgatgaaGAATAATGATGGAAGTTTGGCTGTTTTTACTGAGCCGGATCGTTTCGACTCGTTCAGTCAAAGGAACGAATCTTCGACTAATTTCATTCATTTGAGTCAGTATTGACCAGAGCACGAAGGAACACTTATCTTTCGCGAACAGTAGCACCCCAAACGATTCGTTTTCGAGTTTGTTAATCAGAGGTGTTGGAGGCCTatgttttgtttcttttttttctctatgCATGACCTAATTTGCCTGCGCGCATATATGACAGACAGTTGTTGGTCGGGGCACATCTCCAGAGTCACCGGAGATGCCCGTTTTAATCCTGATCAATCAGAAAAATGAATCATGACTCTCGTTTCAGTAAGAGTTGTTCAAAAATAACAAATCGTCCGCGAACTGCACATCCCTAATAAAGAACTGAGGTTGTGATTGCTCTGAGCATGTGACATTTCAGGATTTTGTTGCGGCAGCAACAAATATTATACATTTTTGCTAAACATATTGAACTTCAACTGTGGAGTTTAAAAAGTGTTCTAGGTCTGCTTCTTAACGGAATTActtttgttttcactttgtaCCTACCTACGATGCAAACTTCAAAAGTCGCTCAAGCTGATTTAACCATGCCAGGtgAGGAGTCTAGCCAAGAAAAAGGAGGCAGATGCTGAAGACGTGCCTAATTTCTTCTGCTGCTTTCCAGGACACACAAGAAAGAGGCTGCATAGACACACAGGGGATATACTGTGTCACAAAGAAGGCTGCAGATGACATGGACAAGAGGCTGAACCCCAAAACAATGGAGGATTTTAAACTAATTCTCCTAATTTAAGCTATTTTCCCACTGATCTGAAGCTCCTGCGACAAAGTGGGCCCATGCCATGTTGAGGAGACAGAGAACTGGCTCTCTTCTGAACGCTTTGCTGTGGTTTCTCTTCTTCATTGCCATGACAATGAAACAGGCTTATGGACAATCCATTAGCAGTTCAGAAATTCACCAAATTGTGAAAACATTTATTAAGGAGGAAGTTCACAGGATGGAATCATTTGATTGCAGACTGTACACCCCAACTTTAGCTGATTATAAGAAATGTCCCAGGTCCACACTCACATGCTTTACGACAGAAGTAAAAGTCCTGATGTTAGAATATGGGAAACGTTCTTCATCCTTACACCAGAAAAGACTCACCAAACGACTGACTAAATTGATGTCCTTGATAAAACAGAAGGATGGTGCCAACTGTCCACACTGTGAGGTCCACAGAGAACAGGCAGCAAATGATTTCTTAACAACATTACTAGGGATTCTGGAGTGGATGAACAATCAGGGGTCTCAGTTGCCAGACAGCCACTGAGATGTACACACCCATAGCCAGGGACATCCAAGGACTCACATAAGAGCAGAAAGCTACCTGAACAATTGCTAGATGTAGCAaaatactatatacactaccaagtttggggtcacttagaaatatccttgtttttgaaagaaaagcactttttttgtccgttaatataacatcaaattggtcagaaatacagtgtagacattgttaatgttaatgtgcatatttgtaaacaacagctggtgcacaaaatctaaggaagtctctagattttactcacctgaagtagagtatcttatgataaactgcagaccacactatttgccaagaAAGTTTTCATCTTTACTTTTCGTggttgtttatttaccaccacagatggATGCTGGCAcaaagaccgcactcagtcagctgtatcaggaaataagcaaacaggaaaccg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106580769

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962039.1 True 1872 mRNA 0.40 6 7158014 7184067

Neighbor

gene id symbol gene type direction distance location
LOC110503619 LOC106580766 coding downstream 7632 7128909 ~ 7150382 (-)
LOC110503623 LOC106612682 coding downstream 34200 7120646 ~ 7123814 (-)
zgc:162698 LOC106612685 coding downstream 171691 6974758 ~ 6986323 (-)
LOC110503307 LOC106612692 coding downstream 249280 6901464 ~ 6908734 (-)
LOC110503603 LOC106612693 coding downstream 362906 6757474 ~ 6795108 (-)
LOC110503626 LOC106612677 coding upstream 9903 7193970 ~ 7256664 (-)
spint2 LOC106612675 coding upstream 88277 7272344 ~ 7295472 (-)
LOC110503632 LOC106612668 coding upstream 248237 7432304 ~ 7439464 (-)
LOC110503637 LOC106612664 coding upstream 320874 7504941 ~ 7507252 (-)
LOC110503640 NA coding upstream 328738 7512805 ~ 7515006 (-)
G1899350 NA non-coding downstream 147521 6989719 ~ 7010493 (-)
G1899340 NA non-coding downstream 195074 6962672 ~ 6962940 (-)
G1899339 NA non-coding downstream 195960 6961636 ~ 6962054 (-)
G1899338 NA non-coding downstream 197042 6960702 ~ 6960972 (-)
G1899454 NA non-coding upstream 8079 7192146 ~ 7192350 (-)
G1899520 NA non-coding upstream 128477 7312544 ~ 7312907 (-)
G1899530 LOC106612674 non-coding upstream 143156 7327223 ~ 7328513 (-)
G1899535 NA non-coding upstream 150251 7334318 ~ 7334659 (-)
LOC110503590 LOC106612705 other downstream 697949 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 926206 6181377 ~ 6231808 (-)
G1896030 NA other downstream 1288796 5868896 ~ 5869218 (-)
G1894611 NA other downstream 2804078 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 2863536 4289886 ~ 4294714 (-)
G1899875 NA other upstream 862712 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 2386804 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 2821305 10005372 ~ 10012354 (-)
G1901206 NA other upstream 3021153 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 3214975 10399042 ~ 10399857 (-)

Expression


Co-expression Network