LOC110503640


Basic Information

Item Value
gene id LOC110503640
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7512805 ~ 7515006 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039336.1
tgtaattattttcaattaaaattgtcaaaaaatATTCATAGCAAAGagacatttctcaagcaagaatttagctaggattGTCTGGTAGTGTTCTGAGTGGCGATGGAAAATTtgaaaactagctgtttttgGGGGAGGTTTGGAaatctttcttattggtctattgatgttaacaggcaggccaaaactccataccaccactatcatcattTTCGCAATTTCACAGTATCAtgccaacctcagtgtggaaatattaATACatatgtttttgactgcactgggtctAAAAAGTTTAACCTTAGCATCAGGTACTCTGTTGTGTTTAAAGTATCTccatttaaaggcccagtgttaTTTCGACCTCAATGTACTCATTTTGACAATTACGTTTACTTTtgaaacttaagtatatttaaaaccaagtgctttttgacttttactcaagtagtattttgctAGGAGactaatttgtatttttttacttttacaattgggtactttttctaccactgcaAACAGGCTATTATTGCTGTAACGTTAACTAGCCAACGTTACATTGGCTACACAGTAAGTATAGCTAGGTCGCTGTTTTTCTATATTAAACTACGTACGGTATGTTGTAACACGGAACAAAATAAAGTTTGCGCCAGAAGGGCCCTGTTTGAACGCATAGTTACGCTAACTCCGTATTCACAATGTACAATACTCAGTGAGTCAACTCAAATCCGGCTAACTGgaatttgtctttcagcataaAAATATCCTGCCTCTTCTTCACCAGTGAATCAGGCAGCACTTCAGGGTCATCGCTGATGAAAGGCCTGCAACATGACAAGGAGGAGATACTTGAGGACGAAGAGTATTCGattgagacacagacacacatacacaggacaGGCAGGTGAACATCAACTGGCAGAGAAGCAGCTGAACTGGTTCCCCCCTAGCCCTTCTAGTTTGATGCTGACAGAGGTGGCTGCTGCACATGCTAAACTGGTGGTGCAGGTCATAAAAAtgctctagcctggtcccagatccctCTAGCCTGGTCTTGCTAACTCCTAATGTATGATAGTTGTCATGCCATGTTTCCATAGGAGTTGGCTATATAGTACAAACAGATCATAGACCAAACTAACATTTGGCTGATTTTCAGAACCGAAAGTGAAACTTCAGTGTACTTGAGGACTACTCTAGAAATTGTTGGCTTTGTTGCAAGATAGAAAGGAGAATAAGACGTGGTTTGCTTGTGTGTCACCTGAATGTGAGGGCAAGCGGTTAtgtatgatatggttatgatagtAATGTAGGCCCTAACATGCACTTTGTTTTCAGGTTTGAATGAGACAATATATTCCCCTAACCTTATTattttaataaagtgattgtttATGAATATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039336.1 True 1401 mRNA 0.39 4 7512805 7515006

Neighbor

gene id symbol gene type direction distance location
LOC110503637 LOC106612664 coding downstream 5553 7504941 ~ 7507252 (-)
LOC110503632 LOC106612668 coding downstream 73341 7432304 ~ 7439464 (-)
spint2 LOC106612675 coding downstream 217333 7272344 ~ 7295472 (-)
LOC110503626 LOC106612677 coding downstream 256141 7193970 ~ 7256664 (-)
LOC110503624 NA coding downstream 328738 7158014 ~ 7184067 (-)
LOC110503655 LOC106580791 coding upstream 220127 7735133 ~ 7738306 (-)
LOC110503654 trad1 coding upstream 223447 7738453 ~ 7746131 (-)
LOC110503656 LOC106612654 coding upstream 357356 7872362 ~ 7875185 (-)
LOC110503659 NA coding upstream 422985 7937991 ~ 7947837 (-)
LOC110503311 LOC106612649 coding upstream 479535 7994541 ~ 8035329 (-)
G1899585 NA non-coding downstream 85635 7426951 ~ 7427170 (-)
G1899581 NA non-coding downstream 91973 7420569 ~ 7420832 (-)
G1899553 NA non-coding downstream 107055 7404597 ~ 7405750 (-)
G1899535 NA non-coding downstream 178146 7334318 ~ 7334659 (-)
G1899530 LOC106612674 non-coding downstream 184292 7327223 ~ 7328513 (-)
G1899625 NA non-coding upstream 16531 7531537 ~ 7587823 (-)
G1899644 NA non-coding upstream 43223 7558229 ~ 7558601 (-)
G1899660 NA non-coding upstream 61435 7576441 ~ 7611786 (-)
G1899626 LOC106580784 non-coding upstream 67214 7582220 ~ 7585628 (-)
G1899693 NA non-coding upstream 108554 7623560 ~ 7624082 (-)
LOC110503590 LOC106612705 other downstream 1052740 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 1280997 6181377 ~ 6231808 (-)
G1896030 NA other downstream 1643587 5868896 ~ 5869218 (-)
G1894611 NA other downstream 3158869 4353578 ~ 4353936 (-)
si:dkey-202l22.3 LOC106612399 other downstream 3218327 4289886 ~ 4294714 (-)
G1899875 NA other upstream 531773 8046779 ~ 8047974 (-)
LOC110503680 LOC106612628 other upstream 2055865 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 2490366 10005372 ~ 10012354 (-)
G1901206 NA other upstream 2690214 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 2884036 10399042 ~ 10399857 (-)

Expression


Co-expression Network