LOC110503644 (LOC106612660)


Basic Information

Item Value
gene id LOC110503644
gene name LOC106612660
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 7582158 ~ 7587824 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582079.2
AATGGGAGGGGGTTTTATGGGGAAGGGGTGATCCTCAGTGGGGGGTGATAGGTTCCCGGATTGAGATTTTCGCCATTTTTTTTTACTCCAGTACAACCGGTGGGGTGGAAACGCCACTGATCTATCCGTTGATTTCACAGGACCCGCCGACAGATTGACCTAGTAGCAGCAACTGTCGAGCATTTTTTATCAATTTGTCAGTTTAAACTAAACTTCGCCACTCGCAACAAAATGGGCGACCGGGACGATTTAGTATATCAGGCAAAACTCGCCGAGCAGGCGGAAAGATATGACGaAATGGTGGAGTCCATGAAGAGAGTGGCCGGGTTGGATGTGGAACTAACAGTCGAGGAGCGAAACCTACTATCAGTGGCCTACAAAAATGTCATTGGGGCGAGGAGAGCATCATGGAGGATAATCAGCAGTATTGAACAAAGGGAAGAAAACAAGGGTGGAGAAGACAAATTGAAAATGATCCGGGAATACAGGCAAACGGTTGAGAATGAGCTGAAGTCAATCTGTAATGACATTCTTGATGTACTGGACAAGCACCTTATTCCAGCTGCTAATACGGGAGAGTCCAAGGTCTTCTACTACAAAATGAAAGGCGATTACCACAGGTATCTGGCTGAGTTTGCCACCGGGAACGACCGGAAGGAGGCTGCAGAGAACAGTTTGGTCGCCTACAAAGCTGCTAGCGACATCGCCATGATCGAACTGCCACCGACACACCCCATTCGCCTAGGCCTCGCTCTTAACTTCTCCGTATTTTACTATGAAATCCTCAACTCGCCCGACCGCGCGTGCAGGTTGGCGAAGGCTGCGTTCGATGACGCCATCGCAGAGCTGGACACGCTGAGCGAAGAAAGCTACAAGGACTCCACACTAATCATGCAGTTGTTACGTGACAACCTGACACTATGGACTTCAGACATGCAGGGAGATGCAGGTGAAGAACAGAACAAAGAGGCGCTGCAAGATGTGGAGGATGAGCCCCAGTGAGACATTACAGCCAACCTGAGACcccacccaccccacccccacacacaaaaAACTGTGGCCGCCACGCCCAAGTGACCGCGGCTCTCAGCAGCTCTCTGGCCACATGGTCTTAGAAATAATCAGTCATTgttattatttgtttttgtttttgtttttttgcccttTAATTCAATTCAAATATAAATACCACTTAATTGAGACAATAAATACAATTTTGGAAAGGCAAAGAGTCCctggtttattttatttttcttggtACACGCGGTTCTGAAAAAATTCTTTGTTTTCATTATTGTATTGTTttaattttgttttgtttatgctCTTTCCTCAATATTTTATCAGTTGCTGGATGTATTTTGAGATTTCTTTTTCTTAATGTAATTACAGAAATTAACTTTTATTACTGATACGTCTATTAGTTGTGGGAGCTGTAATATTTCTGTTAGTGAGAGATGCAAATCATTAATCCTTTTTAAGGGCAAGTCTAAACAAAGTCCTCTTTCGTGAACCTAGTTTATCAGAGGAAGTTGGCAAAATTCTTGATATCCACGTGGAGCAAAATGCTTAACTTTTACACCATAGTGATTCTATTGTGATGTTTTGGATTGTATGTTGTGCTAAAATACTGTATTGCGAATACTTGCTGATTTCAGATGAGGGCTGGTAGCCGTAAAAATCAGAGGAAGCGTTGCGTTAACAGACAGTTCTCGACTGGCTTCTGTTGCAAGATGACAGGGTTCTAAATAGATGATTTCAAGCCTGCATGAGTTCATTAATTTTCTGCCTCTTTCCCCTCCTTTTATATAGCTCAATGTTTTCCTTTTCTTCTAGCTTCATTATGTGTAACTTACAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAATCTGTATTGTTCTTACTGAAACACAGCATGGAATTAACATTAAACAATCTAAATTAAACATAC
>XM_021582081.2
AATGGGAGGGGGTTTTATGGGGAAGGGGTGATCCTCAGTGGGGGGTGATAGGTTCCCGGATTGAGATTTTCGCCATTTTTTTTTACTCCAGTACAACCGGTGGGGTGGAAACGCCACTGATCTATCCGTTGATTTCACAGGACCCGCCGACAGATTGACCTAGTAGCAGCAACTGTCGAGCATTTTTTATCAATTTGTCAGTTTAAACTAAACTTCGCCACTCGCAACAAAATGGGCGACCGGGACGATTTAGTATATCAGGCAAAACTCGCCGAGCAGGCGGAAAGATATGACGaAATGGTGGAGTCCATGAAGAGAGTGGCCGGGTTGGATGTGGAACTAACAGTCGAGGAGCGAAACCTACTATCAGTGGCCTACAAAAATGTCATTGGGGCGAGGAGAGCATCATGGAGGATAATCAGCAGTATTGAACAAAGGGAAGAAAACAAGGGTGGAGAAGACAAATTGAAAATGATCCGGGAATACAGGCAAACGGTTGAGAATGAGCTGAAGTCAATCTGTAATGACATTCTTGATGTACTGGACAAGCACCTTATTCCAGCTGCTAATACGGGAGAGTCCAAGGTCTTCTACTACAAAATGAAAGGCGATTACCACAGGTATCTGGCTGAGTTTGCCACCGGGAACGACCGGAAGGAGGCTGCAGAGAACAGTTTGGTCGCCTACAAAGCTGCTAGCGACATCGCCATGATCGAACTGCCACCGACACACCCCATTCGCCTAGGCCTCGCTCTTAACTTCTCCGTATTTTACTATGAAATCCTCAACTCGCCCGACCGCGCGTGCAGGTTGGCGAAGGCTGCGTTCGATGACGCCATCGCAGAGCTGGACACGCTGAGCGAAGAAAGCTACAAGGACTCCACACTAATCATGCAGTTGTTACGTGACAACCTGACACTATGGACTTCAGACATGCAGGGAGATGGTGAAGAACAGAACAAAGAGGCGCTGCAAGATGTGGAGGATGAGCCCCAGTGAGACATTACAGCCAACCTGAGACcccacccaccccacccccacacacaaaaAACTGTGGCCGCCACGCCCAAGTGACCGCGGCTCTCAGCAGCTCTCTGGCCACATGGTCTTAGAAATAATCAGTCATTgttattatttgtttttgtttttgtttttttgcccttTAATTCAATTCAAATATAAATACCACTTAATTGAGACAATAAATACAATTTTGGAAAGGCAAAGAGTCCctggtttattttatttttcttggtACACGCGGTTCTGAAAAAATTCTTTGTTTTCATTATTGTATTGTTttaattttgttttgtttatgctCTTTCCTCAATATTTTATCAGTTGCTGGATGTATTTTGAGATTTCTTTTTCTTAATGTAATTACAGAAATTAACTTTTATTACTGATACGTCTATTAGTTGTGGGAGCTGTAATATTTCTGTTAGTGAGAGATGCAAATCATTAATCCTTTTTAAGGGCAAGTCTAAACAAAGTCCTCTTTCGTGAACCTAGTTTATCAGAGGAAGTTGGCAAAATTCTTGATATCCACGTGGAGCAAAATGCTTAACTTTTACACCATAGTGATTCTATTGTGATGTTTTGGATTGTATGTTGTGCTAAAATACTGTATTGCGAATACTTGCTGATTTCAGATGAGGGCTGGTAGCCGTAAAAATCAGAGGAAGCGTTGCGTTAACAGACAGTTCTCGACTGGCTTCTGTTGCAAGATGACAGGGTTCTAAATAGATGATTTCAAGCCTGCATGAGTTCATTAATTTTCTGCCTCTTTCCCCTCCTTTTATATAGCTCAATGTTTTCCTTTTCTTCTAGCTTCATTATGTGTAACTTACAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAATCTGTATTGTTCTTACTGAAACACAGCATGGAATTAACATTAAACAATCTAAATTAAACATAC
>XM_021582082.2
AATGGGAGGGGGTTTTATGGGGAAGGGGTGATCCTCAGTGGGGGGTGATAGGTTCCCGGATTGAGATTTTCGCCATTTTTTTTTACTCCAGTACAACCGGTGGGGTGGAAACGCCACTGATCTATCCGTTGATTTCACAGGACCCGCCGACAGATTGACCTAGTAGCAGCAACTGTCGAGCATTTTTTATCAATTTGTCAGTTTAAACTAAACTTCGCCACTCGCAACAAAATGGGCGACCGGGACGATTTAGTATATCAGGCAAAACTCGCCGAGCAGGCGGAAAGATATGACGaAATGGTGGAGTCCATGAAGAGAGTGGCCGGGTTGGATGTGGAACTAACAGTCGAGGAGCGAAACCTACTATCAGTGGCCTACAAAAATGTCATTGGGGCGAGGAGAGCATCATGGAGGATAATCAGCAGTATTGAACAAAGGGAAGAAAACAAGGGTGGAGAAGACAAATTGAAAATGATCCGGGAATACAGGCAAACGGTTGAGAATGAGCTGAAGTCAATCTGTAATGACATTCTTGATGTACTGGACAAGCACCTTATTCCAGCTGCTAATACGGGAGAGTCCAAGGTCTTCTACTACAAAATGAAAGGCGATTACCACAGGTATCTGGCTGAGTTTGCCACCGGGAACGACCGGAAGGAGGCTGCAGAGAACAGTTTGGTCGCCTACAAAGCTGCTAGCGACATCGCCATGATCGAACTGCCACCGACACACCCCATTCGCCTAGGCCTCGCTCTTAACTTCTCCGTATTTTACTATGAAATCCTCAACTCGCCCGACCGCGCGTGCAGGTTGGCGAAGGCTGCGTTCGATGACGCCATCGCAGAGCTGGACACGCTGAGCGAAGAAAGCTACAAGGACTCCACACTAATCATGCAGTTGTTACGTGACAACCTGACACTATGGACTTCAGACATGCAGGGAGATGAGTCCTAAAGGAGCAAAACAGCTGTTCATTTCCCATAATCTGTACTTTGTGAAGAACAGAACAAAGAGGCGCTGCAAGATGTGGAGGATGAGCCCCAGTGAGACATTACAGCCAACCTGAGACcccacccaccccacccccacacacaaaaAACTGTGGCCGCCACGCCCAAGTGACCGCGGCTCTCAGCAGCTCTCTGGCCACATGGTCTTAGAAATAATCAGTCATTgttattatttgtttttgtttttgtttttttgcccttTAATTCAATTCAAATATAAATACCACTTAATTGAGACAATAAATACAATTTTGGAAAGGCAAAGAGTCCctggtttattttatttttcttggtACACGCGGTTCTGAAAAAATTCTTTGTTTTCATTATTGTATTGTTttaattttgttttgtttatgctCTTTCCTCAATATTTTATCAGTTGCTGGATGTATTTTGAGATTTCTTTTTCTTAATGTAATTACAGAAATTAACTTTTATTACTGATACGTCTATTAGTTGTGGGAGCTGTAATATTTCTGTTAGTGAGAGATGCAAATCATTAATCCTTTTTAAGGGCAAGTCTAAACAAAGTCCTCTTTCGTGAACCTAGTTTATCAGAGGAAGTTGGCAAAATTCTTGATATCCACGTGGAGCAAAATGCTTAACTTTTACACCATAGTGATTCTATTGTGATGTTTTGGATTGTATGTTGTGCTAAAATACTGTATTGCGAATACTTGCTGATTTCAGATGAGGGCTGGTAGCCGTAAAAATCAGAGGAAGCGTTGCGTTAACAGACAGTTCTCGACTGGCTTCTGTTGCAAGATGACAGGGTTCTAAATAGATGATTTCAAGCCTGCATGAGTTCATTAATTTTCTGCCTCTTTCCCCTCCTTTTATATAGCTCAATGTTTTCCTTTTCTTCTAGCTTCATTATGTGTAACTTACAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAATCTGTATTGTTCTTACTGAAACACAGCATGGAATTAACATTAAACAATCTAAATTAAACATAC
>XM_021582083.2
AATGGGAGGGGGTTTTATGGGGAAGGGGTGATCCTCAGTGGGGGGTGATAGGTTCCCGGATTGAGATTTTCGCCATTTTTTTTTACTCCAGTACAACCGGTGGGGTGGAAACGCCACTGATCTATCCGTTGATTTCACAGGACCCGCCGACAGATTGACCTAGTAGCAGCAACTGTCGAGCATTTTTTATCAATTTGTCAGTTTAAACTAAACTTCGCCACTCGCAACAAAATGGGCGACCGGGACGATTTAGTATATCAGGCAAAACTCGCCGAGCAGGCGGAAAGATATGACGaAATGGTGGAGTCCATGAAGAGAGTGGCCGGGTTGGATGTGGAACTAACAGTCGAGGAGCGAAACCTACTATCAGTGGCCTACAAAAATGTCATTGGGGCGAGGAGAGCATCATGGAGGATAATCAGCAGTATTGAACAAAGGGAAGAAAACAAGGGTGGAGAAGACAAATTGAAAATGATCCGGGAATACAGGCAAACGGTTGAGAATGAGCTGAAGTCAATCTGTAATGACATTCTTGATGTACTGGACAAGCACCTTATTCCAGCTGCTAATACGGGAGAGTCCAAGGTCTTCTACTACAAAATGAAAGGCGATTACCACAGGTATCTGGCTGAGTTTGCCACCGGGAACGACCGGAAGGAGGCTGCAGAGAACAGTTTGGTCGCCTACAAAGCTGCTAGCGACATCGCCATGATCGAACTGCCACCGACACACCCCATTCGCCTAGGCCTCGCTCTTAACTTCTCCGTATTTTACTATGAAATCCTCAACTCGCCCGACCGCGCGTGCAGGTTGGCGAAGGCTGCGTTCGATGACGCCATCGCAGAGCTGGACACGCTGAGCGAAGAAAGCTACAAGGACTCCACACTAATCATGCAGTTGTTACGTGACAACCTGACACTATGGACTTCAGACATGCAGGGAGATGAGTCCTAAAGGAGCAAAACAGCTGTTCATTTCCCATAATCTGTACTTTCAGGTGAAGAACAGAACAAAGAGGCGCTGCAAGATGTGGAGGATGAGCCCCAGTGAGACATTACAGCCAACCTGAGACcccacccaccccacccccacacacaaaaAACTGTGGCCGCCACGCCCAAGTGACCGCGGCTCTCAGCAGCTCTCTGGCCACATGGTCTTAGAAATAATCAGTCATTgttattatttgtttttgtttttgtttttttgcccttTAATTCAATTCAAATATAAATACCACTTAATTGAGACAATAAATACAATTTTGGAAAGGCAAAGAGTCCctggtttattttatttttcttggtACACGCGGTTCTGAAAAAATTCTTTGTTTTCATTATTGTATTGTTttaattttgttttgtttatgctCTTTCCTCAATATTTTATCAGTTGCTGGATGTATTTTGAGATTTCTTTTTCTTAATGTAATTACAGAAATTAACTTTTATTACTGATACGTCTATTAGTTGTGGGAGCTGTAATATTTCTGTTAGTGAGAGATGCAAATCATTAATCCTTTTTAAGGGCAAGTCTAAACAAAGTCCTCTTTCGTGAACCTAGTTTATCAGAGGAAGTTGGCAAAATTCTTGATATCCACGTGGAGCAAAATGCTTAACTTTTACACCATAGTGATTCTATTGTGATGTTTTGGATTGTATGTTGTGCTAAAATACTGTATTGCGAATACTTGCTGATTTCAGATGAGGGCTGGTAGCCGTAAAAATCAGAGGAAGCGTTGCGTTAACAGACAGTTCTCGACTGGCTTCTGTTGCAAGATGACAGGGTTCTAAATAGATGATTTCAAGCCTGCATGAGTTCATTAATTTTCTGCCTCTTTCCCCTCCTTTTATATAGCTCAATGTTTTCCTTTTCTTCTAGCTTCATTATGTGTAACTTACAGCTAATTTGTACTACTGGATATCTGACTGGAGCCACAATCTGTATTGTTCTTACTGAAACACAGCATGGAATTAACATTAAACAATCTAAATTAAACATAC

Function

NR:

description
14-3-3 protein epsilon-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K06630 YWHAE; 14-3-3 protein epsilon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582079.2 False 1958 mRNA 0.43 6 7582158 7587824
XM_021582081.2 False 1955 mRNA 0.43 6 7582158 7587824
XM_021582082.2 False 2003 mRNA 0.43 7 7582158 7587824
XM_021582083.2 True 2006 mRNA 0.43 7 7582158 7587824
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110503643 crk coding upstream 2676 7573459 ~ 7579482 (+)
LOC110503642 LOC106612661 coding upstream 18785 7532123 ~ 7563373 (+)
LOC110503638 LOC100380766 coding upstream 51222 7515001 ~ 7530936 (+)
LOC110503636 LOC106612665 coding upstream 83803 7474566 ~ 7498355 (+)
LOC110503634 LOC106612666 coding upstream 134114 7439436 ~ 7448044 (+)
LOC110503647 LOC106612655 coding downstream 12473 7600297 ~ 7659377 (+)
LOC110503648 LOC106612656 coding downstream 71653 7659477 ~ 7667149 (+)
LOC110503649 LOC106612657 coding downstream 79453 7667277 ~ 7696402 (+)
LOC110503651 LOC106612658 coding downstream 109920 7697744 ~ 7713472 (+)
LOC110503653 skip coding downstream 130070 7717894 ~ 7729700 (+)
G1897182 NA non-coding upstream 22834 7558914 ~ 7559324 (+)
G1897068 NA non-coding upstream 72446 7448822 ~ 7509712 (+)
G1897120 NA non-coding upstream 144084 7437716 ~ 7438074 (+)
G1897117 NA non-coding upstream 153711 7428246 ~ 7428447 (+)
G1897115 NA non-coding upstream 155472 7426483 ~ 7426686 (+)
G1897206 NA non-coding downstream 26337 7614161 ~ 7614492 (+)
G1897221 NA non-coding downstream 55112 7642936 ~ 7643701 (+)
G1897251 NA non-coding downstream 127732 7715556 ~ 7715802 (+)
G1897252 NA non-coding downstream 129446 7717270 ~ 7717590 (+)
LOC110503629 LOC106612674 other upstream 253847 7316925 ~ 7350759 (+)
G1896931 NA other upstream 563600 7017795 ~ 7018558 (+)
G1896894 NA other upstream 640602 6940416 ~ 6941556 (+)
G1895266 LOC106612719 other upstream 2059293 5521415 ~ 5522865 (+)
bl1s3 bl1s3 other upstream 2062126 5518991 ~ 5520163 (+)
LOC118944073 LOC106612646 other downstream 488382 8076117 ~ 8080686 (+)
G1898300 NA other downstream 1769227 9357051 ~ 9359164 (+)
G1898315 cep164 other downstream 1855470 9443294 ~ 9444057 (+)
G1898293 LOC106612633 other downstream 1932108 9519932 ~ 9525546 (+)
G1898441 NA other downstream 2000216 9588040 ~ 9589691 (+)

Expression

LOC110503644(LOC106612660) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 100.
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LOC110503644(LOC106612660) Expression in each Bioproject

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LOC110503644(LOC106612660) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4000.
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Co-expression Network