mpzl3 (LOC106612639)


Basic Information

Item Value
gene id mpzl3
gene name LOC106612639
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9285976 ~ 9292964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961959.1
TCCACTTAACTAGAAAAAAACGGCTGAAGAAACTGCGTGTGGGGTGACTCGCTTCCCTTTCCCTCTTTGGTCAGGCGAGGAGTGTCAGCAATACTTCCTGAAACACCTGTTTGTCAGGTAGTGCACACTGGGTAGGCACAGCGGAGAAAGTGAGTCACACAAAAAAATGGACGACGAGTATCCGAAACGCAAAATTTGACAAGACTTGACAATTTATTCTAACTTTTTCTAAAGCCCTACATCATTTTACTAAAATGGTTTGGCGTCAACACAGGATTATACGTTTGAACATTGTCGTGTTGCTGTATTTAATGGTTTGTTTTGTGCTGTGCCCTGTGTCAGCCATGACAGTGAGCTCTCCTGCAGAGGTCCATTCTGTGAGGGGCAATGCCGTCACCCTGACTTGCACCTTCACCTCTACCAGCCGAGCCACCAGCCGTATGTCAGTGGACTGGTCCTACAGGCCCCAGACCGGAGGCCCTCCGCAGGCATTCTTCCACTTCTCCTCTCTGGCGTTCCCTCCGCAGGACGGCCAGTTTAACGGGCGCGTGAAGTGGCTGGGCAGCCCGGCCCGGGGTGAGGCCTCCATCCAGCTCCTCAACGCCTCCCTCAGCGACAACGGCACCTACACCTGCTCCGTCAGGAACCCCCCTGACGTCCACGGATCCCCCACCTCACAGACCGTCCTCACCGTGACGCCCAAAGtgCCCACGGTTCGTTTCTCGGACGTGGCGGTGCTTCTAGCCTTCATTCTGCTTCCTTCCGCCATCATCACGCTGGCTCTGCTGGGTCGCATGTGCTGCCCTCCGAGGGACAAGAGCCAGACCCAGGGTTACCACTCCCCTATTGAGGTCACACCCGGAGATGAGCCTGGCTTCAAGCAGATCAACCGCAAGGAGAAAAACATGACATGCTGCGACCTATATTTTCTGGATTCCGACTATGAAGATTACTACATCCACAAAGAGAGGCCTCTGGCTCAGGGAGAGACCATGGCcgtgtctcagtgctagagacccCTGGTGGCGGTGCTCTGTAAGGACAGAGGCCCCCTCCATGCCTTGCCAATGGGAGTGGTTGGCCAGAATTCTCGCTTATACTGTTTGTTAAAAATGCCAAGATTCCTGGACTTAGTTCTGTCTCACACATCAGTATCCACTCACACTCCTCCCTTCTCTCATGGCTTGTCAACAGCTGATTCTACTGGTGGGATAGACATGGATCCGGTGCctgacacacggacacacacatacGTTTTGCACTATACTATAAACATTTCTGGATAGATTTTCTTATTATGAAGGAGATGCGTATATTACTAAGTTATTGTCTGCTTTATCACTTTTGTAATGTAGAATCATTGTTTTTGTACAGCTATTGCGAGAGTTTTTATTGGACCTTATGGAATCTATTGCTAGAATTGTAGACAGTCTTTACCTGTGGCTACATCTGCTTCATTGAGTCCAATTAATATTATTTGAAACATGTATTTCAGAGTTTGTGTTACATTTGAACCCGTTGGTATAACTACATTCAGGAGTGGACCAACTATGACCTCTGATTTAGATGTTGAATGAATTTACAGGATTTGATTTACATGTTGGAATTTGGATGTACAGTGTAGTGAATGTTGTTGAATGTATGCATGTGCAAATGATTGAAAAAATGATGCTTAATAAAATACATAAATGTTCTGGTCCGTTGGTAAAATGGTTTGTCCATTTACCATGTAAGTTGAACTACAGTACATTTTCAATAGTGTCGGTCTTTAAAGCTTATCGGACTTAAACTGGCACCCATGCCGTCCATGTTGCTGGTGTAAACTACCCTGAAGTAAAATATAATCGcgacatgtaaaatgttggtcccatgtttaatgagttgaaataaacggtcccagaaatgttcca

Function

NR:

description
myelin protein zero-like protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961959.1 True 1910 mRNA 0.47 6 9285976 9292964

Neighbor

gene id symbol gene type direction distance location
LOC110503666 neum coding downstream 2047 9273955 ~ 9283929 (-)
LOC118944074 NA coding downstream 738977 8539022 ~ 8546999 (-)
LOC110503663 tp53i13 coding downstream 1216590 8063744 ~ 8069386 (-)
LOC110503311 LOC106612649 coding downstream 1250647 7994541 ~ 8035329 (-)
LOC110503659 NA coding downstream 1338139 7937991 ~ 7947837 (-)
LOC110503667 LOC106612638 coding upstream 16086 9309050 ~ 9330335 (-)
LOC110503669 LOC100136515 coding upstream 45768 9338732 ~ 9346765 (-)
LOC110503672 tmm25 coding upstream 54788 9347752 ~ 9356001 (-)
LOC110503671 LOC106612637 coding upstream 64047 9357011 ~ 9401389 (-)
LOC110503673 cep164 coding upstream 146426 9439390 ~ 9457857 (-)
G1900608 NA non-coding downstream 163693 9121832 ~ 9122283 (-)
G1900456 NA non-coding downstream 312555 8915445 ~ 8973421 (-)
G1900371 NA non-coding downstream 488159 8785310 ~ 8797817 (-)
G1900351 NA non-coding downstream 532074 8752895 ~ 8753902 (-)
G1900191 NA non-coding downstream 797060 8488676 ~ 8488916 (-)
G1900730 NA non-coding upstream 40224 9333188 ~ 9333463 (-)
G1900810 NA non-coding upstream 167585 9460549 ~ 9460795 (-)
G1900815 NA non-coding upstream 175424 9468388 ~ 9468642 (-)
G1900715 NA non-coding upstream 176003 9468967 ~ 9471097 (-)
G1899875 NA other downstream 1238002 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 2825911 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3054168 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3416758 5868896 ~ 5869218 (-)
G1894611 NA other downstream 4932040 4353578 ~ 4353936 (-)
LOC110503680 LOC106612628 other upstream 277907 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 712408 10005372 ~ 10012354 (-)
G1901206 NA other upstream 912256 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 1106078 10399042 ~ 10399857 (-)
G1901405 NA other upstream 1323960 10616924 ~ 10617481 (-)

Expression


Co-expression Network