LOC110503667 (LOC106612638)


Basic Information

Item Value
gene id LOC110503667
gene name LOC106612638
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9309050 ~ 9330335 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582110.2
ACTTGCCCCATATCGGCTGAGACTGCTAGTCAATGCGTGTTGGACTGGGGTTTACAGACAGTCTAAGCGACAGGTCCAGAATAGTTCACCGAGTTTATAGAATCGAAGTGTCCAGTCCCTTCAGATGTTATTCGGGAGGTTGGTGGGGACTCCACAAGAGTCTGGTCAATTGGGTCGACTCCGGACACCTTTTCCAATGTGCGTAAAACGGTTGTATCTCCTCGTCCTCTTTTCCGGACTAGCAACTTCAGGCGTGTTACCGGTCAGTGGGATGAGGGTGTACACGTCGGGGGAGGTGGAGGCGGTGAACGGCACAGATGTGCGGCTGAAATGTACCTTCCAGAGCAGCTcgcccatcaccccagcaacgcTCACTGTCTCATGGAGCTTCCGCCCCCTCGAACCTGGCCGTGAGGAGTCAGTGTTCTACTACCATGAGAGGCCTTACCCTCCCCCAGAAGGGCGTTTCCATAAGCGGGCGACATGGGCGGGTGATATCATGGGGCGGGACGCCTCCATCGTGGTGCGTGAGGTCAAGTTCACCTACAACGGGACGTTCAGCTGCCAAGTGAAGAACCCTCCGGACGTCCACGGCAACGCGGGGGAGGTGAAACTGACCGTGGTCACCACAGCCTCCTTCTCTGAGATTGTCATTCTGGCTGTAGCCATCGGAGGCGCCATCATGCTGATGGTCATCCTCCTCGTCATCATCATGTCAATAAGGCAATGTCTcaagaagagacaggaagagtggGTGGAGGAACTGCCtcgcagagagagaaaggacccTACAGTGTggtaagacagagagagcgagaaggagcgagagagagtgggatCTCTCCAACCTGTCTTCCCTCTGGCTGGGCTCTGTGGTGCTTACCTCTGGGACAGGGCTCAGTCAATTGCTCTGTCTGCGTGGACACTCTCCTCCGAACCTAGCTTTGGAACCAAAACCTGGACTTATCGTTGGGCAGATGTTTTTACAAAGAGCAGACTTCAATGCTAAAAGTGCCTTAGAATACTACTGTAGATTATCCATCTGCTGGATCCTGTATCTTACCGCCATGCACCTTCTGGAAAGACAGTAGGCCTGCATTAATATTTTCCTGTATATCAAATGGGCTTCTTAACACATTTCCTGTTTAAGTGTAGATGTTTTATGAGATAGTTGTGGAAAATAATGTACAGTATTTCTATTGTGATTTACTACTACCAGTTTCAAACTCTAACATCTGCCAAATCATTTTCCAATCGCATAGGACTTAGTAAGCCAATGCCCATGGTTGTAccagcagtctctctctcatctggctCAATGCATTTCAACCACAAGTCCACGACAAGATGTCTTTACATTTCTGTCTTAGTTTACTGCTGATCAATGATATTATTTGATTTTGTCCTGAAGTGATTTTGTATTTCTAAATTGATGTGGGTTTTTTTATCAGTGAAAATGTTCAACTACTGCAGAAATACTCAAAATGCTGTCAATATTCACTGCAAGACCTAAGGCACTTGCTTAAAGCAGACATTTCTCAAATATTATAATCAACATACAGTTGATTATATCAACATTGTTAAATCATTATTTTCAAATTATTAAACATTTCAAATAATTGACTATTTCACTATGACTGTCACTGTATTGTAGTTTTTTCAACTTTAGACGGTTGAAACCTTATGTGTCTGTTTTAGACAGTGCAATTATGGTCAGTTGAACACATCAAATTCTATATCAGTAGTGTTCTTTATCTATGGTCTATGGGTGAAGGGACTACTT

Function

NR:

description
myelin protein zero-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582110.2 True 1783 mRNA 0.46 4 9309050 9330335

Neighbor

gene id symbol gene type direction distance location
mpzl3 LOC106612639 coding downstream 16086 9285976 ~ 9292964 (-)
LOC110503666 neum coding downstream 25121 9273955 ~ 9283929 (-)
LOC118944074 NA coding downstream 762051 8539022 ~ 8546999 (-)
LOC110503663 tp53i13 coding downstream 1239664 8063744 ~ 8069386 (-)
LOC110503311 LOC106612649 coding downstream 1273721 7994541 ~ 8035329 (-)
LOC110503669 LOC100136515 coding upstream 8397 9338732 ~ 9346765 (-)
LOC110503672 tmm25 coding upstream 17417 9347752 ~ 9356001 (-)
LOC110503671 LOC106612637 coding upstream 26676 9357011 ~ 9401389 (-)
LOC110503673 cep164 coding upstream 109055 9439390 ~ 9457857 (-)
LOC110503678 LOC106612633 coding upstream 189595 9519930 ~ 9525556 (-)
G1900608 NA non-coding downstream 186767 9121832 ~ 9122283 (-)
G1900456 NA non-coding downstream 335629 8915445 ~ 8973421 (-)
G1900371 NA non-coding downstream 511233 8785310 ~ 8797817 (-)
G1900351 NA non-coding downstream 555148 8752895 ~ 8753902 (-)
G1900191 NA non-coding downstream 820134 8488676 ~ 8488916 (-)
G1900730 NA non-coding upstream 2853 9333188 ~ 9333463 (-)
G1900810 NA non-coding upstream 130214 9460549 ~ 9460795 (-)
G1900815 NA non-coding upstream 138053 9468388 ~ 9468642 (-)
G1900715 NA non-coding upstream 138632 9468967 ~ 9471097 (-)
G1899875 NA other downstream 1261076 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 2848985 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3077242 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3439832 5868896 ~ 5869218 (-)
G1894611 NA other downstream 4955114 4353578 ~ 4353936 (-)
LOC110503680 LOC106612628 other upstream 240536 9570867 ~ 9579939 (-)
G1901072 LOC107388308 other upstream 675037 10005372 ~ 10012354 (-)
G1901206 NA other upstream 874885 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 1068707 10399042 ~ 10399857 (-)
G1901405 NA other upstream 1286589 10616924 ~ 10617481 (-)

Expression


Co-expression Network