Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503676 |
| gene name | LOC106612634 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 9482600 ~ 9495647 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: beta-secretase 1-like |
| id | description |
|---|---|
| K04521 | BACE1; beta-site APP-cleaving enzyme 1 (memapsin 2) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021582129.2 | False | 3257 | mRNA | 0.48 | 9 | 9482600 | 9495647 |
| XM_036961493.1 | True | 2342 | mRNA | 0.49 | 9 | 9489171 | 9495647 |
9,478,000
9,480,000
9,482,000
9,484,000
9,486,000
9,488,000
9,490,000
9,492,000
9,492,000
9,494,000
9,496,000
9,498,000
9,500,000
9,502,000
9,504,000
9,506,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| apoa-i-2 | apoa-i-2 | coding | upstream | 11506 | 9468959 ~ 9471094 (+) |
| LOC110503674 | LOC106612636 | coding | upstream | 43522 | 9408040 ~ 9439078 (+) |
| LOC110503670 | NA | coding | upstream | 145953 | 9333173 ~ 9336647 (+) |
| LOC110503312 | LOC106612642 | coding | upstream | 209712 | 8255380 ~ 9272888 (+) |
| LOC110503665 | LOC106612643 | coding | upstream | 1285709 | 8090555 ~ 8196891 (+) |
| LOC110503677 | LOC106612632 | coding | downstream | 363 | 9496010 ~ 9519139 (+) |
| LOC110503679 | LOC106612629 | coding | downstream | 71986 | 9567633 ~ 9570777 (+) |
| LOC110503683 | LOC106592294 | coding | downstream | 101003 | 9596650 ~ 9606337 (+) |
| LOC118944033 | NA | coding | downstream | 118834 | 9614481 ~ 9618152 (+) |
| LOC110503685 | LOC106592294 | coding | downstream | 142363 | 9595928 ~ 9652587 (+) |
| G1898385 | NA | non-coding | upstream | 13901 | 9468450 ~ 9468699 (+) |
| G1898384 | NA | non-coding | upstream | 14390 | 9467900 ~ 9468210 (+) |
| G1898383 | NA | non-coding | upstream | 15237 | 9467134 ~ 9467363 (+) |
| G1898380 | NA | non-coding | upstream | 16650 | 9465741 ~ 9465950 (+) |
| G1898316 | cep164 | non-coding | upstream | 39812 | 9441350 ~ 9442788 (+) |
| G1898398 | NA | non-coding | downstream | 33428 | 9529075 ~ 9529313 (+) |
| G1898416 | NA | non-coding | downstream | 64390 | 9560037 ~ 9560466 (+) |
| G1898417 | NA | non-coding | downstream | 64913 | 9560560 ~ 9560882 (+) |
| G1898423 | NA | non-coding | downstream | 70819 | 9566466 ~ 9566680 (+) |
| G1898435 | NA | non-coding | downstream | 83928 | 9579575 ~ 9579815 (+) |
| G1898315 | cep164 | other | upstream | 38543 | 9443294 ~ 9444057 (+) |
| G1898300 | NA | other | upstream | 123436 | 9357051 ~ 9359164 (+) |
| LOC118944073 | LOC106612646 | other | upstream | 1402614 | 8076117 ~ 8080686 (+) |
| LOC110503629 | LOC106612674 | other | upstream | 2154289 | 7316925 ~ 7350759 (+) |
| G1896931 | NA | other | upstream | 2464042 | 7017795 ~ 7018558 (+) |
| G1898293 | LOC106612633 | other | downstream | 24285 | 9519932 ~ 9525546 (+) |
| G1898441 | NA | other | downstream | 92393 | 9588040 ~ 9589691 (+) |
| G1898545 | LOC106612623 | other | downstream | 352825 | 9848472 ~ 9849339 (+) |
| G1898772 | NA | other | downstream | 807535 | 10303182 ~ 10304418 (+) |
| G1898883 | NA | other | downstream | 992206 | 10487853 ~ 10488334 (+) |
