LOC110503684 (LOC106592295)


Basic Information

Item Value
gene id LOC110503684
gene name LOC106592295
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9606325 ~ 9608246 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582139.2
TACACACAGCAAACGCATAACAGCTGGTCTATGTCACATACACCCCACCTGAGAGAACCATGTACATTTGAATCTATCCAGTTCCATGTAACCTTCAAGTGTCAAGCGAGCAGAGATAGAGGAAATGAGAGTGTAACAAGTGGAAAAGCAGGTTAAAAGGGGCAGTGCTGGTTAAACGGGCTACACAGGTTCAACCATTGGGCTCTGCTTCAGAGGCACAGCTTGGTGCTGGACAGGTGAGTGGACAGACACAGCTAGTCGTGACCAGAGAACACGAGGAGAAAGCAATCAGCTAGGAAGTAGGAACGCCCCATCCAATAATGTCGGTCCCGGTAGCCCTGTGTGTTCTCCTGGCTGGAACCCTGTCCCTCGTTGAGGGGGACGTGCTGGCCAACTTCGAAGACATCCCGGAGTGTGTTGAGTATTTCTACCAGGGGAAGGTACCGGGCTGGGGGGCTGCCACCCCCGGCGCTGCCCGCCTGTGCCAGCGCTTCTACAACAGGTACCACTTTGCCACGCTGTACGACACCAACCACCGCATTGCTGTGTATTCAGCCTACCGCTTCCAGCCCAGCAACGGAGGAGGCAGGGAGAAGCGCTGGTTTGTGGAGCCACAGCTCGTGAACCTTACGTGGGGTGCAGAGATGAAGGATGGGTACTGGCTGGGGAAAGATCACCCTGGGGTTTACCTGGGCGAGAGACAGGCACTCAATGAGGACTACACCCACTCTGGCTTCGACCGCGGCCATCTCAACCCCAATGGACACCATGCAGTCCCCAGTCGTAACGCCACCTTCACCCTGACCAACGTGGTGCCCCAGAACCCCAAGCTCAACCAGAACGCCTGGGCCCGCCACGAGTCCCAGCTCACCGACCTGTTCAAGGCCCAGTGCGCCCAGGCCTACGTGCTGGTGGGCGCCATCCCCTCCACAGACAACTGGATTGTCAAGGACAACGTCCGACGCGTCAACATCCCCGAGTACATCTGGAACGCCTACTGCTGTGTGGACAACAACGGTGAGCCTGTCCGTAGCGGTGGCGCCACCGCCCTCAACACCGAGCAGAACCGAGTGGACCAGCGCTCGCTGCTGGAGCTGAACGGTTTCCTGCAGCAGTACTCCAACGCGCCAGTAGGGGAGTTGTTTCACAACAACTGCCAGGCAGTGCCCGAGGCGTAGTTTCTCCCACTCATGGGTTTCTAATCCTTATATGACAGTGGCAATGTGAGCTAAAACTTCAGTTCACACGTAAGTTTCAGTCTTTCAGCCAAGTCAAGTGCTTCCTACTGTGAAAATGACATCATGAACTACAGTGGATAAATAAAGAACTATGTTTGGAGAGATACATATT

Function

NR:

description
endonuclease domain-containing 1 protein-like

GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582139.2 True 1350 mRNA 0.55 3 9606325 9608246

Neighbor

gene id symbol gene type direction distance location
LOC110503681 LOC106612627 coding downstream 13242 9587197 ~ 9593083 (-)
LOC110503680 LOC106612628 coding downstream 26386 9570867 ~ 9579939 (-)
cbln20 LOC106612736 coding downstream 60253 9544805 ~ 9546072 (-)
cbln18 LOC106612737 coding downstream 69859 9533602 ~ 9536466 (-)
LOC110503678 LOC106612633 coding downstream 80769 9519930 ~ 9525556 (-)
LOC110503686 LOC106592295 coding upstream 44324 9652570 ~ 9654648 (-)
dpf1 dpf1 coding upstream 49725 9657971 ~ 9730313 (-)
LOC110503314 LOC106612624 coding upstream 163178 9771424 ~ 9846389 (-)
LOC110503688 LOC106612623 coding upstream 239976 9848222 ~ 9862581 (-)
LOC110503315 NA coding upstream 271851 9880097 ~ 9887061 (-)
G1900884 NA non-coding downstream 10414 9595582 ~ 9595911 (-)
G1900875 NA non-coding downstream 39574 9566346 ~ 9566751 (-)
G1900872 NA non-coding downstream 46920 9559166 ~ 9559405 (-)
G1900855 NA non-coding downstream 77429 9528680 ~ 9528896 (-)
G1900844 NA non-coding downstream 87194 9516559 ~ 9519131 (-)
G1900901 NA non-coding upstream 5812 9614058 ~ 9614979 (-)
G1900903 NA non-coding upstream 9302 9617548 ~ 9629252 (-)
G1900922 NA non-coding upstream 74182 9682428 ~ 9697449 (-)
G1900945 NA non-coding upstream 123448 9731694 ~ 9731937 (-)
G1900949 NA non-coding upstream 126714 9734960 ~ 9735248 (-)
G1899875 NA other downstream 1558351 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3146260 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3374517 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3737107 5868896 ~ 5869218 (-)
G1901072 LOC107388308 other upstream 397126 10005372 ~ 10012354 (-)
G1901206 NA other upstream 596974 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 790796 10399042 ~ 10399857 (-)
G1901405 NA other upstream 1008678 10616924 ~ 10617481 (-)
G1901516 NA other upstream 1245585 10853831 ~ 10856437 (-)

Expression


Co-expression Network