LOC110503686 (LOC106592295)


Basic Information

Item Value
gene id LOC110503686
gene name LOC106592295
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9652570 ~ 9654648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582146.2
TGGACTTCCTATTGAAGATCGGACGATCATTATATCAAACCAACTATATCCCCTGTATCTCACTCTGGAGAGACAGACGACCTGACAGAGCAAGTCAAGTTCTCCACGCATCGACATTCTCCTCACCACCAATGAAATACAGCGAAAATACAGCATTACAGAAGTTGCAGATAAACAGAGTACACACAGCAAACGCATAACAGCTGGTCTATGTCACATACACCCCACCTGAGAGAACCATGTACATTTGAATCTATCCAGTTCCATGTAACCTTCAAGTGTCAAGCGAGCAGAGATAGAGGAAATGAGAGTGTAACAAGTGGAAAAGCAGGTTAAAAGGGGCAGTGCTGGTTAAACGGGCTACACAGGTTCAACCATTGGGCTCTGCTTCAGAGGCACAGCTTGGTGCTGGACAGGTGAGTGGACAGACACAGCTAGTCGTGACCAGAGAACACGAGGAGAAAGCAATCAGCTAGGAAGTAGGAACGCCCCATCCAATAATGTCGGTCCCGGTAGCCCCGTGTGTTCTCCTGGCTGGAACCCTGTCCCTCGTTGAGGGGGACGTGCTGGCCAACTTCGAAGACATCCCGGAGTGTGTTGAGTATTTCTACCAGGGGAAGGTACCGGGCTGGGGGGCTGCCACCCCCGGCGCTGCCCGCCTGTGCCAGCGCTTCTACAACAGGTACCACTTTGCCACGCTGTACGACACCAACCACCGCATTGCTGTGTATTCAGCCTACCGCTTCCAGCCCAGCAACGGAGGAGGCAGGGAGAAGCGCTGGTTTGTGGAGCCACAGCTCGTGAACATTACGTGGGGTGCAGAGATGAAGGATGGGTACTGGCTGGGGAAAGATCACCCTGGGGTTTACCTGGGCGAGAGACAGGCACTCAATGAGGACTACACCCACTCTGGCTTCGACCGCGGCCATCTCAACCCCAATGGACACCATGCAGTCCCCAGTCGTAACGCCACCTTCACCCTGACCAACGTGGTGCCCCAGAACCCCAAGCTCAACCAGAACGCCTGGGCCCGCCACGAGTCCCAGCTCACCGACCTGTTCAAGGCCCAGTGCGCCCAGGCCTACGTGCTGGTGGGCGCCATCCCCTCCACAGACAACTGGATTGTCAAGGACAACGTCCGACGCGTCAACATCCCCGAGTACATCTGGAACGCCTACTGCTGTGTGGACAACAACGGTGAGCCTGTCCGTAGCGGTGGCGCCACCGCCCTCAACACCGAGCAGAACCGAGTGGACCAGCGCTCGCTGCTGGAGCTGAACGGTTTCCTGCAGCAGTACTCCAACGCGCCAGTAGGGGAGTTGTTTCACAACAACTGCCAGGCAGTGCCCGAGGCGTAGTTTCTCCCACTCATGGGTTTCTAATCCTTATTTGACAGTGGCAATGTAAGCTAAAACTTCAGTTCACACATAAGTTTCAGTCTTTCAGCCAAGTCAAGTGCTTCCTACTGTGAAAATGACATCATGAACTACAGTGGATAAATAAAGAACTATGTTTGGAGAGATACATATT

Function

NR:

description
endonuclease domain-containing 1 protein-like

GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582146.2 True 1530 mRNA 0.54 3 9652570 9654648

Neighbor

gene id symbol gene type direction distance location
LOC110503684 LOC106592295 coding downstream 44324 9606325 ~ 9608246 (-)
LOC110503681 LOC106612627 coding downstream 59487 9587197 ~ 9593083 (-)
LOC110503680 LOC106612628 coding downstream 72631 9570867 ~ 9579939 (-)
cbln20 LOC106612736 coding downstream 106498 9544805 ~ 9546072 (-)
cbln18 LOC106612737 coding downstream 116104 9533602 ~ 9536466 (-)
dpf1 dpf1 coding upstream 3323 9657971 ~ 9730313 (-)
LOC110503314 LOC106612624 coding upstream 116776 9771424 ~ 9846389 (-)
LOC110503688 LOC106612623 coding upstream 193574 9848222 ~ 9862581 (-)
LOC110503315 NA coding upstream 225449 9880097 ~ 9887061 (-)
LOC110503691 LOC106612619 coding upstream 237573 9892221 ~ 9897938 (-)
G1900903 NA non-coding downstream 23318 9617548 ~ 9629252 (-)
G1900901 NA non-coding downstream 37591 9614058 ~ 9614979 (-)
G1900884 NA non-coding downstream 56659 9595582 ~ 9595911 (-)
G1900875 NA non-coding downstream 85819 9566346 ~ 9566751 (-)
G1900872 NA non-coding downstream 93165 9559166 ~ 9559405 (-)
G1900922 NA non-coding upstream 27780 9682428 ~ 9697449 (-)
G1900945 NA non-coding upstream 77046 9731694 ~ 9731937 (-)
G1900949 NA non-coding upstream 80312 9734960 ~ 9735248 (-)
G1900970 NA non-coding upstream 103312 9757960 ~ 9823033 (-)
G1901047 NA non-coding upstream 234235 9888883 ~ 9943437 (-)
G1899875 NA other downstream 1604596 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3192505 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3420762 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3783352 5868896 ~ 5869218 (-)
G1901072 LOC107388308 other upstream 350724 10005372 ~ 10012354 (-)
G1901206 NA other upstream 550572 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 744394 10399042 ~ 10399857 (-)
G1901405 NA other upstream 962276 10616924 ~ 10617481 (-)
G1901516 NA other upstream 1199183 10853831 ~ 10856437 (-)

Expression


Co-expression Network