LOC110503688 (LOC106612623)


Basic Information

Item Value
gene id LOC110503688
gene name LOC106612623
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9848222 ~ 9862581 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582149.2
GCCCGGCGCAGTTGGACCACAGGCACGTCTGTCAATCTAGTTAAACCTCTAATTCCGGGTCTGAAAGTTGTTGCAAAACAGCGTCCATTGACTTCACGGGCAAGAGGACAGTCGTCAGCTATTGCAAATTCTATAGAAAGCATCCCTTCAATAaGATGCTAGCTGAGGTGTTTCAGGTGCTGCGGGGAGCAGGGAAGGTTGGCCAAGCGTTTGCCAACACCCAGGGGGAGATGCTGAGGCTAATGGCCTGTAACTCCACGCTGGGCACTGGGGTCAAAGCTGCCCAGGAGGTGGTCGAGGGCGTGATGGGCACAGTCATGGGTGGTTCTGCCATGCAACAGTCTATCAAGGATGATGTGTTCCCTGATGCTGAGGGATGGGAGGAAATGGACCCGGATGAGGCTGCTAAATGGGCGGTGGGCTCTGAATTCCCCCCAGGCCCAGGGGCCACAGAGATGCCCAGCGGAGTTCCTCCCAGCCCAGCCCGGGGTCCAGGGGGAGCAGGCTTGCCTGGCCAAAGTGCCCGGTTCCTGCACATCGCCTCGACGCAACACCACACCAGGTTTGTCCATGACTCGGTAGTGGCCAGACTCACCCCAGAGGACATCGAGAAGGCCAGGAAGTCCAAGCAGGCACTCTCCAGGCCTATTGTTAAGCAGAAGCTTAGTGATCGTGCAAGAGAGAGGAAGGTCCCTGCCACGAGAATCAGCAGGCTGGTCAACTTCGGGGGTCTGGCAGTCGGGCTGGGACTAGGTGCCATTGCAGAGGTGGCGAAGCAGTCTATGGGAGCCAAGCGTGCAgAGGGTGCCCTGTTggactctcctctcctgtccgaGGCCAATGCTGAGAGGATAGTGGACACCTTGTGCAAAGTCAGAGGGGCAGCCCTCAAAATAGGACAGATGCTCAGTATACAAGACAACTCCTTCATAAACCCCCAGCTACAGAAGATCTTTGAGCGAGTCCGACAGAGCGCGGACTTCATGCCCGCCTGGCAGATGAATAAAGTTCTGGAGGAGGAGCTAGGTGCAGGCTGGAGGGAGAAGCTGTCGTCGTTTGCGGAAAAGCCCTTCGCCGCCGCCTCCATTGGCCAGGTGCATCACGGGATGCTGCAGGACGGCAGGGAGGTCGCCATGAAGATCCAGtacccAGGAGTAGTTGAGAGCATccacagtgacatcaacaacctGATGTCTGTGCTGAAGATGAGTATTGTTCTACCAGACGGCTTGTTTGCAGACAGTAGTCTAGAGGTCCTTCAAAGAGAGCTGGCGTGGGAGTGCGACTACAAGAGAGAGGCGGAGAGTGCCAAGCATTTTAAGTCACTTCTGGCGGATGACCCATTTTTCCACGTGCCATTTGTGGTGGACGAGCTCTCAGGAAGGAGGGTTCTGGCCATGGAGCTGGTGTCAGGGGTACCGCTGGACAGCTGTGTGGATCTGGATCAGGAGACAAGGAATCAGatCTGCTTCAACATCCTGCAGCTGTGTCTGAGAGAGCTCTTTGAGTTCCGCTTCATGCAGACGGACCCCAACTGGGCCAACTTCTTTTACAACGCTGAGCAGAACAAGATTATTCTGTTGGATTTCGGTGCGTGCCGGGATTACCCTGAGGCATTCACAGATGATTACGTACAGGTGGTGCACGCAGCCTCCATCGGAGATAGGGAGACTGTTCTGGAGAAATCCAAGGACCTCAAGTTCCTCACGGGGTTTGAGGCCAAGGCGTTCCAGGACGCCCACGTGGAGGCAGTGATGATCCTGGGCGAGGCCTTCGCCAACTCTGACCCCTTTGACTTTGGTACCCAGAGCACCACGCAGCGGATCCAGAGCCTGATCCCTATCATGCTGCGTCAccgcctcacccccccccccgagGAGACCTACTCCCTGCACCGCAAGATGGCCGGCTCCTTCCTCATCTGTTCCAAGCTTGGCGCCAAAATCGCCTGCAAGGACATGTTCCTGGACATCTACAACTCCTACCAACAGCGGCGGCTGGAGAAGGAGCAGGCTGCCCAAGTTCAGGCCTAGATGGGGGTCAAAGGTCATTACTAGGGGTCACTCTCTGGCAGAAGTCCCATGGCTGTGGACAAGGTTGATTTAAGAGAGGGTAACTGTACTACATGGGTGATCTACTGACTCCCAGTACTTTGACTGTCAGTGACTTGATGCCACTCCACCACTTAATGAGGTGGGCTGACAGTACGGAGTGGTAGGTGGAGTGTCTGCTTGTATAAACGAACACAGAAAGAAACTCTATGGCATTTGTGTGATTGAATCACTTGAGATTTGTGTTAATAATATTTGTTTAATGTAAAGGTATGAAGGCTATATAACTGATTTGAGCTGTGtctctgttgggggggggggggtaatatgTTTTGAGTGTTGGTTTGTGTTTTTGATGTACCCTGGTCCAATGGTTTACGACAAACTCATTTTAATGCAGATGGATTAATGCCACAAACATGACATTTGTTTCTGAAAATGGCACTGTTTGTGCTAAAAGGCATTTTGACACTGAAAAGTAATTTGGGCATAATTGTACACACTACAAAGATTACTCTTTCAAATATGGTTGCAGTCTTCCAACAGGTATATTTTTTTGGcaaaaaaaatttaaaatatgATATACTATTTAATGCCATAAAATATCTTCTTCTATACCAGTCTCAAAATACAAGGCTTATTTCACTGCCTTGTTGGGTTGCAGTATTAAGCCCTCTTGTGAATGTATTTCCATATGTTAGAAGAGCAGTGTTTGTATGTCTTTTAAAGGACTGTTTGATGGAAACCATAGATGTCCTTAAACAGTGCAATAAAATAGTCCTGCTAGATGACGCCAACT
>XM_021582148.2
agcgacttccagcgacttttaggacagccaatatcTACTtaccttactgaggagttggcaacactgggtCGCTAGCTTCTCTACCAATCAGCAGAAAACAACACTGGAGATCAGATGATCTGAAACATGATGGaGATGCTAGCTGAGGTGTTTCAGGTGCTGCGGGGAGCAGGGAAGGTTGGCCAAGCGTTTGCCAACACCCAGGGGGAGATGCTGAGGCTAATGGCCTGTAACTCCACGCTGGGCACTGGGGTCAAAGCTGCCCAGGAGGTGGTCGAGGGCGTGATGGGCACAGTCATGGGTGGTTCTGCCATGCAACAGTCTATCAAGGATGATGTGTTCCCTGATGCTGAGGGATGGGAGGAAATGGACCCGGATGAGGCTGCTAAATGGGCGGTGGGCTCTGAATTCCCCCCAGGCCCAGGGGCCACAGAGATGCCCAGCGGAGTTCCTCCCAGCCCAGCCCGGGGTCCAGGGGGAGCAGGCTTGCCTGGCCAAAGTGCCCGGTTCCTGCACATCGCCTCGACGCAACACCACACCAGGTTTGTCCATGACTCGGTAGTGGCCAGACTCACCCCAGAGGACATCGAGAAGGCCAGGAAGTCCAAGCAGGCACTCTCCAGGCCTATTGTTAAGCAGAAGCTTAGTGATCGTGCAAGAGAGAGGAAGGTCCCTGCCACGAGAATCAGCAGGCTGGTCAACTTCGGGGGTCTGGCAGTCGGGCTGGGACTAGGTGCCATTGCAGAGGTGGCGAAGCAGTCTATGGGAGCCAAGCGTGCAgAGGGTGCCCTGTTggactctcctctcctgtccgaGGCCAATGCTGAGAGGATAGTGGACACCTTGTGCAAAGTCAGAGGGGCAGCCCTCAAAATAGGACAGATGCTCAGTATACAAGACAACTCCTTCATAAACCCCCAGCTACAGAAGATCTTTGAGCGAGTCCGACAGAGCGCGGACTTCATGCCCGCCTGGCAGATGAATAAAGTTCTGGAGGAGGAGCTAGGTGCAGGCTGGAGGGAGAAGCTGTCGTCGTTTGCGGAAAAGCCCTTCGCCGCCGCCTCCATTGGCCAGGTGCATCACGGGATGCTGCAGGACGGCAGGGAGGTCGCCATGAAGATCCAGtacccAGGAGTAGTTGAGAGCATccacagtgacatcaacaacctGATGTCTGTGCTGAAGATGAGTATTGTTCTACCAGACGGCTTGTTTGCAGACAGTAGTCTAGAGGTCCTTCAAAGAGAGCTGGCGTGGGAGTGCGACTACAAGAGAGAGGCGGAGAGTGCCAAGCATTTTAAGTCACTTCTGGCGGATGACCCATTTTTCCACGTGCCATTTGTGGTGGACGAGCTCTCAGGAAGGAGGGTTCTGGCCATGGAGCTGGTGTCAGGGGTACCGCTGGACAGCTGTGTGGATCTGGATCAGGAGACAAGGAATCAGatCTGCTTCAACATCCTGCAGCTGTGTCTGAGAGAGCTCTTTGAGTTCCGCTTCATGCAGACGGACCCCAACTGGGCCAACTTCTTTTACAACGCTGAGCAGAACAAGATTATTCTGTTGGATTTCGGTGCGTGCCGGGATTACCCTGAGGCATTCACAGATGATTACGTACAGGTGGTGCACGCAGCCTCCATCGGAGATAGGGAGACTGTTCTGGAGAAATCCAAGGACCTCAAGTTCCTCACGGGGTTTGAGGCCAAGGCGTTCCAGGACGCCCACGTGGAGGCAGTGATGATCCTGGGCGAGGCCTTCGCCAACTCTGACCCCTTTGACTTTGGTACCCAGAGCACCACGCAGCGGATCCAGAGCCTGATCCCTATCATGCTGCGTCAccgcctcacccccccccccgagGAGACCTACTCCCTGCACCGCAAGATGGCCGGCTCCTTCCTCATCTGTTCCAAGCTTGGCGCCAAAATCGCCTGCAAGGACATGTTCCTGGACATCTACAACTCCTACCAACAGCGGCGGCTGGAGAAGGAGCAGGCTGCCCAAGTTCAGGCCTAGATGGGGGTCAAAGGTCATTACTAGGGGTCACTCTCTGGCAGAAGTCCCATGGCTGTGGACAAGGTTGATTTAAGAGAGGGTAACTGTACTACATGGGTGATCTACTGACTCCCAGTACTTTGACTGTCAGTGACTTGATGCCACTCCACCACTTAATGAGGTGGGCTGACAGTACGGAGTGGTAGGTGGAGTGTCTGCTTGTATAAACGAACACAGAAAGAAACTCTATGGCATTTGTGTGATTGAATCACTTGAGATTTGTGTTAATAATATTTGTTTAATGTAAAGGTATGAAGGCTATATAACTGATTTGAGCTGTGtctctgttgggggggggggggtaatatgTTTTGAGTGTTGGTTTGTGTTTTTGATGTACCCTGGTCCAATGGTTTACGACAAACTCATTTTAATGCAGATGGATTAATGCCACAAACATGACATTTGTTTCTGAAAATGGCACTGTTTGTGCTAAAAGGCATTTTGACACTGAAAAGTAATTTGGGCATAATTGTACACACTACAAAGATTACTCTTTCAAATATGGTTGCAGTCTTCCAACAGGTATATTTTTTTGGcaaaaaaaatttaaaatatgATATACTATTTAATGCCATAAAATATCTTCTTCTATACCAGTCTCAAAATACAAGGCTTATTTCACTGCCTTGTTGGGTTGCAGTATTAAGCCCTCTTGTGAATGTATTTCCATATGTTAGAAGAGCAGTGTTTGTATGTCTTTTAAAGGACTGTTTGATGGAAACCATAGATGTCCTTAAACAGTGCAATAAAATAGTCCTGCTAGATGACGCCAACT

Function

NR:

description
atypical kinase COQ8B, mitochondrial-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582149.2 False 2850 mRNA 0.51 15 9848222 9861863
XM_021582148.2 True 2830 mRNA 0.51 15 9848222 9862581

Neighbor

gene id symbol gene type direction distance location
LOC110503314 LOC106612624 coding downstream 1833 9771424 ~ 9846389 (-)
dpf1 dpf1 coding downstream 117909 9657971 ~ 9730313 (-)
LOC110503686 LOC106592295 coding downstream 193574 9652570 ~ 9654648 (-)
LOC110503684 LOC106592295 coding downstream 239976 9606325 ~ 9608246 (-)
LOC110503681 LOC106612627 coding downstream 255139 9587197 ~ 9593083 (-)
LOC110503315 NA coding upstream 17516 9880097 ~ 9887061 (-)
LOC110503691 LOC106612619 coding upstream 29640 9892221 ~ 9897938 (-)
LOC110503694 NA coding upstream 61730 9924311 ~ 9941768 (-)
LOC110503696 LOC106612616 coding upstream 116432 9979013 ~ 9984042 (-)
LOC110503700 LOC107388308 coding upstream 142759 10005340 ~ 10008987 (-)
G1900970 NA non-coding downstream 25189 9757960 ~ 9823033 (-)
G1900949 NA non-coding downstream 112974 9734960 ~ 9735248 (-)
G1900945 NA non-coding downstream 116285 9731694 ~ 9731937 (-)
G1900922 NA non-coding downstream 150773 9682428 ~ 9697449 (-)
G1900903 NA non-coding downstream 218970 9617548 ~ 9629252 (-)
G1901047 NA non-coding upstream 26302 9888883 ~ 9943437 (-)
G1900968 NA non-coding upstream 59290 9921871 ~ 9922678 (-)
G1901071 NA non-coding upstream 69953 9932534 ~ 9937452 (-)
G1901082 NA non-coding upstream 110213 9972794 ~ 9973426 (-)
G1901087 NA non-coding upstream 121727 9984308 ~ 9985894 (-)
LOC110503680 LOC106612628 other downstream 274073 9570867 ~ 9579939 (-)
G1899875 NA other downstream 1800248 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3388157 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3616414 6181377 ~ 6231808 (-)
G1896030 NA other downstream 3979004 5868896 ~ 5869218 (-)
G1901072 LOC107388308 other upstream 142791 10005372 ~ 10012354 (-)
G1901206 NA other upstream 342639 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 536461 10399042 ~ 10399857 (-)
G1901405 NA other upstream 754343 10616924 ~ 10617481 (-)
G1901516 NA other upstream 991250 10853831 ~ 10856437 (-)

Expression


Co-expression Network