LOC110503315


Basic Information

Item Value
gene id LOC110503315
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9880097 ~ 9887061 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503315
CTCCTATTGGGATGGCTATTTGTCCCTGTCTACCTCACAGTGGGGGTAAGTTACACAAGACCATTGTATGCCAGCTAACATGGCATACTGGAGAGATTTGTGTCGATTGGTAATTTCTGCATTTCTTGTTGCTTAGGTAATTACAATGCCTCAGTACCTGAAGAAGAGGTTTGGGGAAACCAGGATCAGTTTGTACCTCTCCGTCATTTCTCTGTTCCTCTACATCTTCACCAAGATCTCTGTGAGTGTTGGACAGGGCTCCcgaaccctgttcctggagagctaccgttgTGTAGGTCTTCGCTCCAACCTTAATCtagtgcacctgattctaatTATTAGCTGGTTGATgggttagttacaactggagtTACAGCGAAAACCCACAGGAGGgcggctctccaggaacagggttggagagccctggtctggGACAACACTATGAGGCACTGTTTGTAACATGCTATAAACGTCCGCCACAGTCCTTTATCATTACATTTTCTTCAATATTGATAGTATCTGTGGTATTTCCAAGTCTCCTGAGTTCTGTACGTTTGATTGAGGTATGAAAGGCATTGCGATATAAACATACCCGTGGACCAGTCTGACTGTCTcctcgtctctgtctctccggGTGGACATGTTCTCCGGGGCTGTGTTCATACAGCAGGCTCTAGGCTGGAACATCGATGTGGCTGTGATAGCCCTCCTCTCCATCACAGCTCTGTACACAGTCACAGGGGGCCTAGCTGCTCTGATGTACACAGACACCGTCCATACATTCGTTATCATCGCTGGCGCCTTCAGCCTCACAGGTTTCGCCTTCTTTGAGGTGGGGGGCTACAATGCTCTGCTGGAGAAGTACAGGTTAGCACTGCCCTCCATGTACCAGTCCCTGGAGCCCCAGCTCTACAACATCTCCCCCCAGTGCTTCACCCCTGAAAACGACGCCTTCCAGCTGCTGGGACCTGCCCTGGCCGGGGGTCCTCTTTGGCATCACCATCGTGGGCGGCTGGTGTTGGTGCACCGACCAGGTGATCATGCAGCGCTGCCTGGCGGCCTGCAGTCTGACCCATGTGAAGGCGTCTGCATCATGTGTGGGTACCTGAAACTGCTCCCCAGGTTCCTTATGGTGTTCCCTGGAATGATCAGCCGCATGTTCTTCCCAGATGAGGTGGGTTGTGTGGTGCCAGAAGTGTGTGGGACGGAGGTGGGCTGCTCCAACATCGCCTACCCCAAACTGGTGGTCTCTGTGATGCCCAATGgtcTGAGGGGCCTGATGCTGGCGGTCATGCTGGTGGTCCTGATGAGCTCCCTGGCTTCCATCTTCAACAGCAGCAGCACCCTGTTCACCATGGACATCTGGACCCGCTTCAGACCGCAGACCAGAGAGAGCAAGCTCATGGTCGTTGGCAGGTATGGTCCTTTTTTCACTTGGTTTAAATAGGAAAACTTGGTTTATGTAGAAAAGTTCAGCTCTCCCAGACCATTTGCTGGAGTAGGTCA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503315 True 1506 mRNA 0.52 6 9880097 9887061

Neighbor

gene id symbol gene type direction distance location
LOC110503688 LOC106612623 coding downstream 17516 9848222 ~ 9862581 (-)
LOC110503314 LOC106612624 coding downstream 33708 9771424 ~ 9846389 (-)
dpf1 dpf1 coding downstream 149784 9657971 ~ 9730313 (-)
LOC110503686 LOC106592295 coding downstream 225449 9652570 ~ 9654648 (-)
LOC110503684 LOC106592295 coding downstream 271851 9606325 ~ 9608246 (-)
LOC110503691 LOC106612619 coding upstream 5160 9892221 ~ 9897938 (-)
LOC110503694 NA coding upstream 37250 9924311 ~ 9941768 (-)
LOC110503696 LOC106612616 coding upstream 91952 9979013 ~ 9984042 (-)
LOC110503700 LOC107388308 coding upstream 118279 10005340 ~ 10008987 (-)
LOC110503698 LOC107388308 coding upstream 122300 10009361 ~ 10012404 (-)
G1900970 NA non-coding downstream 57064 9757960 ~ 9823033 (-)
G1900949 NA non-coding downstream 144849 9734960 ~ 9735248 (-)
G1900945 NA non-coding downstream 148160 9731694 ~ 9731937 (-)
G1900922 NA non-coding downstream 182648 9682428 ~ 9697449 (-)
G1900903 NA non-coding downstream 250845 9617548 ~ 9629252 (-)
G1901047 NA non-coding upstream 1822 9888883 ~ 9943437 (-)
G1900968 NA non-coding upstream 34810 9921871 ~ 9922678 (-)
G1901071 NA non-coding upstream 45473 9932534 ~ 9937452 (-)
G1901082 NA non-coding upstream 85733 9972794 ~ 9973426 (-)
G1901087 NA non-coding upstream 97247 9984308 ~ 9985894 (-)
LOC110503680 LOC106612628 other downstream 305948 9570867 ~ 9579939 (-)
G1899875 NA other downstream 1832123 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3420032 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3648289 6181377 ~ 6231808 (-)
G1896030 NA other downstream 4010879 5868896 ~ 5869218 (-)
G1901072 LOC107388308 other upstream 118311 10005372 ~ 10012354 (-)
G1901206 NA other upstream 318159 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 511981 10399042 ~ 10399857 (-)
G1901405 NA other upstream 729863 10616924 ~ 10617481 (-)
G1901516 NA other upstream 966770 10853831 ~ 10856437 (-)

Expression


Co-expression Network