LOC110503691 (LOC106612619)


Basic Information

Item Value
gene id LOC110503691
gene name LOC106612619
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 9892221 ~ 9897938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582151.2
GCTAGCCAATGAGACTAGCGAAACCATTGCATTGCGGTAATGCGGTTCAGAGAGGGAGACAAGTGAATTGTGCGGCCGACAACAGTCAGGCAGGTCTCTGGGGCAATAAAAACAGTATTTTATGTTCGTTTTACATCCGTAATGTGTTTGAGATGTTTGTGTTTTATGCCATGATTGACTAATTCCTCTGATAAGACAGAAAGGGGTGCTTTGGCGGATGATCTTTAGAGGGCTGCATTCAGCAGTTGCTAACAAACGTTAGCTAGCCGCCGCCGGGCGGTCTGTTGTTATAGTCTGCATGGTGGTTCTGAGAACCATGAGCCGTGCTGCACCCCACACTGGAGGCCGTACTCACTCAAACCAGGACAGGCAAGGCGGATCGGAGGGTGGGACACACGGATGTCAACTGTCAGCTTCCCTTTTTGACTGACTACAGACAATCGGGCCCAAAGGAGAAGCTACTAACAGTAACTGTCTGGCCCCTGGTGACATCCACACAATCAGAGCCCAGGACAGGACCACCAAGTAGGGTAGTCTCCCCTTAATGAAGATGAGTGCAGTCCGTGGAGGAACAATCACCTGGCGGCCACAGCCCTGGCAGGACGGTGACAGTGGGggaggggagcccctttcggacaGTGACTCTGAAGAAGAGGACTTTCCCGACGACAGCACCACTCCTTTAGGAGACTACGTCACACATGGGTTGAAGCAGCTATTGGATGCTCAGCAGCTGTGTGATGTCACTCTGTTAGTGGAGGGGAAGAGGTTTATGTGTCACAGAGTCCTCTTGGCAGCGGTCAGCCCGTATTTCCGTGCAATGTTCACTAGCCCCTTGGTGGAGTCCCGCCTTACTGAGATCCGATTGGAGGAGGTGACGCCGTCAGTCATGGAGACTGTCATCCAGTTTGTCTACACTGGGGAGGCGGGGCTCTGCCTGGACACGGCCGAGGACCTGTTTGTGGCGGCCAATCGGCTTCAAGTGATGCCCCTGCAGGACCTGTGCTCCAGGTTCCTGTTTGAACACCTGTCTGTAGACAACTGCCTGGGCATGTACTCTCTGGCCCGCTCCCACCACGACCAGCTGCTCCTGAGGGCCTCTCTGAGGCTGGTGGCCCAGCACTTCCCACGCGTGGCCCGCCAGAAGGACTTCCTGCTGCTGGACCCAGGTACCCTGGGAAGCCTGCTGGGCTCTGACCGCCTGGGCATAGACTCTGAGGCAGAGGTGTACGACGCGGCGCGCCGCTGGGCCGAGCACCAGCCCCTGGACCGTTACAGCCACATGCCGGCCCTGCTCCACCACCTCCGCCCTGGCCTGCTGTCCCTGGAGGAGAGCCAGCGGCTGAGCCAGGAGCTGGGACCTGCAGCAGCCGGGGAGGGCCTGGGGGGCCCGCTGAGGCCCCGGGAAGGCATGTTCGAGAAGAAGATAGTGTGTGTGGACCTAAAGCCACGGGAGGACGAGTCGCTGAACGAGAGGGACTTCACGGTGGACTGCTTCGACCCACGCACAGGAAAATGGGAGAAGCTGGCTGCCCTGGGCTCTTTGCTGTGCCCAGGTTGCACGGCCATTGGGGGGCGGCTGTTCGTAGCGGGGGGCATACTGCGGGGGGGCACGGTGTCCACGGAGGTCCATGAGTATGACTCTGTGTTGGATCGCTGGCAGGAGCGGTCGCCCATGGTGCAGCCCCGGGCCATGCTGGGTCTGCTGGGCTGTGGGGAGTCACTCTACGCCCTGGGGGGCTGCAACAGAGGAGCCATGCTGGACTCATGTGAGATCCTGGACCTGGCCTCTCTCCAGTGGGGCCCTGGGCCCCGTCTGCCCCTGCCACTGCGCTCCTTTGCCTGTGCCGCCTTGCGCGGCCGCATCTACCTGCTGGGCGGCACCACGCTGGAGCAGAACCGGGCGGTGGTGCACGCTGGCGTGCTCATCTACCACACCCTGACTGACTCATGGACCCGCGTGGGACTGGACTCTGGCGCCACCTGCCTGGCCGGAGGGGTGGCAGTGCGGGGAGGGGTCTGTGCCATTGGAGGCTACATGAGGGACGCCACAAAGTTTATAGATGGAAACTACACCCATCTGGAACCTCTGGAAGCCACGGGGCGGGTGCTGTTCTTCAGGGAGGGCCGGGGCACAGGGGTGGAAAGGGAGGTGACAGGGGCGGTGGTGTctgagaggggtgggggtggggggagtgACCGAGCCCCCAGTCCGGTGGTTTTCCCGGGGTTGCCCAGGCGGATTGCTGCCGGGGGCGTGGCCAGGTGGAAACGCAGGATATACGTGCTGGGCGGGGAGAACGGCTCCCGTTTCTATGACAGTGTGTACTGTTGGAAGCCTGGCTGGCGCAGCTGGGTCCAGAGACGGGAGAAACTACCCGGAGACACGGGGGGAGTCAGCCAGTTCGGCTGTACCACCCTCAAGTTCCCCAAGAAACACATCCTGTCCCGGCTGAGACTGGCTAGGGAGGACCGCAATCCTGATGATGACTAGCCACAGCCGGATGAATGAGTTGTGGCTAAGACCAGCATTCATGGGGTTTCAGTAATGAAATGTTATCAACTTTTTACACTTGAGAAAGTGGGGGGGGGAAGGGGACTCGCATCTGAATGTAACCACCGAATGCCACAACAACACTAAAGTTCTAATCAAAAATGATTTGAATGCATTTAAATGGTCTGAAACTTGTCTGCCTGTTGAACACACATCCTCAGCCTTTGCCACCTTCTATAGGAATTTAACGACTGCATAGGGCTATGTTTTGGATGACTGGCTGCGAATGTTTATTGAATTGTTTTATTTCTGCCTTTTCTATTCCAGACATTCTGAAATTCACTAAAGCATCCCATGTATGTAACTTTAGTCTTTCACTTTTCAATGATTCCAGggccatgttcattaggcacgaAACGGAAGAAAAtgaactgaaacagggaaggactaCCTACCAGGACTTGTCCAATAACCTAAACATTTATTTTCCATTGCAttatgttttgtaatgttttttgATTTAATGCTCTAATAAACATGACCTAGATTTCAGTCACTTGTTATTTTTGGTCAGTTTCTCTTCATCGCTATTCACCCTAACACTTATCCTCCTCCAATCAGATATAGTGTTATCATCAGAGGGGATAACGTTATTGCCCCCAAGTCGCCAAATTCTGTTTTATTTAATTTTCAGATGCATGGGTTACTTACCGCAAGAGCATGCAGATCTGCCAGAATACCTGACAcctaaatatttgttttattttagttGAACACGCCCCTTTGCTCTATAGAGCTGTGTGAAGATATTTGGAGtttaaatgtgtatgtgtgttggggtgtgaATGTTGGATTATGGAATGTAACAACAGGGGAGtcgtctcttcccccccccccccttaagagAAACGTCACCTGACTGATGTAATCTGATGTTTTTGAACTGAAAGTCAAATTGATAATTTGATGACAGTTATGCTATCAAATGATTAAAGGAATATTTGCTTAA

Function

NR:

description
PREDICTED: kelch-like protein 12

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582151.2 True 3503 mRNA 0.54 5 9892221 9897938
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110503315 NA coding downstream 5160 9880097 ~ 9887061 (-)
LOC110503688 LOC106612623 coding downstream 29640 9848222 ~ 9862581 (-)
LOC110503314 LOC106612624 coding downstream 45832 9771424 ~ 9846389 (-)
dpf1 dpf1 coding downstream 161908 9657971 ~ 9730313 (-)
LOC110503686 LOC106592295 coding downstream 237573 9652570 ~ 9654648 (-)
LOC110503694 NA coding upstream 26373 9924311 ~ 9941768 (-)
LOC110503696 LOC106612616 coding upstream 81075 9979013 ~ 9984042 (-)
LOC110503700 LOC107388308 coding upstream 107402 10005340 ~ 10008987 (-)
LOC110503698 LOC107388308 coding upstream 111423 10009361 ~ 10012404 (-)
LOC110503704 LOC106612609 coding upstream 206628 10104566 ~ 10114248 (-)
G1900970 NA non-coding downstream 69188 9757960 ~ 9823033 (-)
G1900949 NA non-coding downstream 156973 9734960 ~ 9735248 (-)
G1900945 NA non-coding downstream 160284 9731694 ~ 9731937 (-)
G1900922 NA non-coding downstream 194772 9682428 ~ 9697449 (-)
G1900903 NA non-coding downstream 262969 9617548 ~ 9629252 (-)
G1900968 NA non-coding upstream 23933 9921871 ~ 9922678 (-)
G1901071 NA non-coding upstream 34596 9932534 ~ 9937452 (-)
G1901082 NA non-coding upstream 74856 9972794 ~ 9973426 (-)
G1901087 NA non-coding upstream 86370 9984308 ~ 9985894 (-)
G1901088 NA non-coding upstream 88204 9986142 ~ 9986610 (-)
LOC110503680 LOC106612628 other downstream 318072 9570867 ~ 9579939 (-)
G1899875 NA other downstream 1844247 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3432156 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3660413 6181377 ~ 6231808 (-)
G1896030 NA other downstream 4023003 5868896 ~ 5869218 (-)
G1901072 LOC107388308 other upstream 107434 10005372 ~ 10012354 (-)
G1901206 NA other upstream 307282 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 501104 10399042 ~ 10399857 (-)
G1901405 NA other upstream 718986 10616924 ~ 10617481 (-)
G1901516 NA other upstream 955893 10853831 ~ 10856437 (-)

Expression

LOC110503691(LOC106612619) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
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LOC110503691(LOC106612619) Expression in each Bioproject

Bar chart with 21 bars.
LOC110503691(LOC106612619) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network