Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503316 |
| gene name | prss16 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 10129892 ~ 10139994 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| prss16 | Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Orthologous to human PRSS16 (serine protease 16). |
| description |
|---|
| delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036961067.1 | False | 2218 | mRNA | 0.53 | 15 | 10129892 | 10139994 |
| TU2174452 | True | 1202 | lncRNA | 0.45 | 1 | 10137566 | 10138767 |
10,118,000
10,120,000
10,122,000
10,124,000
10,126,000
10,128,000
10,130,000
10,130,000
10,132,000
10,134,000
10,136,000
10,138,000
10,140,000
10,142,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503704 | LOC106612609 | coding | downstream | 15644 | 10104566 ~ 10114248 (-) |
| LOC110503698 | LOC107388308 | coding | downstream | 117488 | 10009361 ~ 10012404 (-) |
| LOC110503700 | LOC107388308 | coding | downstream | 120905 | 10005340 ~ 10008987 (-) |
| LOC110503696 | LOC106612616 | coding | downstream | 145850 | 9979013 ~ 9984042 (-) |
| LOC110503694 | NA | coding | downstream | 188124 | 9924311 ~ 9941768 (-) |
| LOC110503705 | hnrnpl | coding | upstream | 3034 | 10143028 ~ 10153094 (-) |
| LOC110503706 | LOC105026808 | coding | upstream | 12296 | 10152290 ~ 10159142 (-) |
| LOC110503317 | LOC106612604 | coding | upstream | 20900 | 10160894 ~ 10263430 (-) |
| LOC118944110 | NA | coding | upstream | 147114 | 10287108 ~ 10301655 (-) |
| LOC110503707 | LOC106612603 | coding | upstream | 163048 | 10303042 ~ 10351767 (-) |
| G1901162 | NA | non-coding | downstream | 486 | 10128930 ~ 10129406 (-) |
| G1901147 | LOC106612610 | non-coding | downstream | 29326 | 10096286 ~ 10100566 (-) |
| G1901146 | NA | non-coding | downstream | 36995 | 10092560 ~ 10092897 (-) |
| G1901144 | LOC106612610 | non-coding | downstream | 38635 | 10090983 ~ 10091257 (-) |
| G1901212 | NA | non-coding | upstream | 79429 | 10219423 ~ 10223013 (-) |
| G1901251 | NA | non-coding | upstream | 135847 | 10275841 ~ 10276160 (-) |
| G1901258 | NA | non-coding | upstream | 143194 | 10283188 ~ 10283398 (-) |
| G1901072 | LOC107388308 | other | downstream | 117538 | 10005372 ~ 10012354 (-) |
| LOC110503680 | LOC106612628 | other | downstream | 555743 | 9570867 ~ 9579939 (-) |
| G1899875 | NA | other | downstream | 2081918 | 8046779 ~ 8047974 (-) |
| LOC110503590 | LOC106612705 | other | downstream | 3669827 | 6371958 ~ 6472758 (-) |
| LOC118944082 | NA | other | downstream | 3898084 | 6181377 ~ 6231808 (-) |
| G1901206 | NA | other | upstream | 65226 | 10205220 ~ 10205948 (-) |
| G1901302 | LOC106612600 | other | upstream | 259048 | 10399042 ~ 10399857 (-) |
| G1901405 | NA | other | upstream | 476930 | 10616924 ~ 10617481 (-) |
| G1901516 | NA | other | upstream | 713837 | 10853831 ~ 10856437 (-) |
| LOC110503734 | rnf7 | other | upstream | 775560 | 10915471 ~ 10918092 (-) |
