LOC110503316 (prss16)


Basic Information

Item Value
gene id LOC110503316
gene name prss16
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 10129892 ~ 10139994 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961067.1
ATGGCCAGTGAAGTCTTACAGCCTGAGGGGGACGACATGGCCAGGACTTCCTGGAACATGCGACGCATCATCGCCATGTACCAGGAAACCTTCACCGTCATTGAGAAGTGTCTGAAGCCTGTGGTTGTGGCAGTGAAGGGAGCTTGTGCTGTAGGAGTGGATCTGATCTCTCAGGATGCCTGGTTTCAGGTGAAGGCAACGTGGAACATGAGCATGCTGCAGACGGAGGATGTCATGAAGTCAGCTGTGGCCGCCATGGAGAAGAAAAGACGAGTTCTGAGGAAGATTAAGGAGCGCGTGCGTAAAATTCAGTATGAAAAAGCGAAGAAGAATGTGCTGATGAGCGCAGTCAACGGGCATAAACCCATATGCGAAGTGAGAGACGGGAAAATTCACCAACCCCTGGACCACTTCGACAGTCAAAACGATGAAACCTTTCCTCAGaggtttTTAGTGAATGAAGCCTATTGGGAGCGTCCTCATGGCCCAGTGTTCCTGTTCATCGGAGGGGAGGGCCCCATCTCTGAATTCGATGTGCTGGCAGGCCACCACGTGGACATGGCTGAGGAGCACGGGGCCCTGCTTGTGGCCCTGGAGCATCGTTTCTACGGCGAGAGCATCAACAAAGACGGCCTGGAGACTGAGAACCTGGGAGACCTGTCCAGCCAGCAGGCTCTCGCCGACATCGCAGAATTCCATCAATACATCAGCGATCGCTTTGACCTCTCCGACAAAAATACCTGGATCAGCTTCGGAGGTTCCTATGCTGGGGCCTTGTCTGCCTGGCTCAGGGGAAAGTTCCCCCACCTGGTCTACGGTGCTGTGGCCTCCTCCGCTCCTGTCAAAGCCAAACTGGACTATTCCGCCTTCAACAAAGTGGTGGGTCTAAGTCTTGCAGACGAGGACGTTGGAGGTTCAGCTAAGTGTCTGGGGGACATCTGGGAGGCCTTCGCTGCCGTGGAGGCCGCCCTGTTTGCGGGGAACGCTACTGAGGTTGGGAAGGACTTTGGGTGCTGTGAGACTCCTGAGGATCTGGAGGACCAGATTGAGCTGATGCAGAGCCTGGCTGACATCGTCATGGGAACTGTGGCGTACAACGAGGAGGGGGGCATCCTGACTATTGAGGAGCTCTGTGACATCATGACCAATGAGACAGAGACCTTCTATTCGGAGACTGAGGCCTACGAACGGCTGATCAAACTGGTGCAGATAGACCGTGCCACTGGCGAGGAGCCCTGTCTGGATGTGTCCCACAAGCAGACCATCAAGGACTTGAGTGACACCAATCTGGACTCTGCCTacaatggagagagacagtggtaCTACCAGACCTGCACCGAGTTCGGCTTCTTCCAGACATGTGAGGACACCAGCTGTCCCTTCTCCCGCATGCTGACCCTGCAGGCTCAGACCGACTTGTGTCCTGAGGTGTTCAACATCCCCCAGCACAGTCTGCCCGGACACATCGCCTTCACCAACAAGTACTATGGAGGAGACCACCCCGACACCGACAGGGTGCTCTATGTCAACGGTGACATTGACCCCTGGCACGAGCTCAGCGTCCTGGAAGAGGACTTGGACAAGGAGGACAAAGACATGACCATCCTCATCGAGGGCACCGCCCACTGTGCCGACATGAACCCCGATGGGGTCGCAGACCGCCCCGCCCTGAAGCAGGCACGCAAGGCCATTGAGAGGAAGGTTGCCAAGTGGCTGAAGGAAGCTGCCTGGAAGCTCGTGGGCTGATGGACCCAAGGCAGGTCACCTGATCATCTGACTGTCATGACCATCACTCAGCCCATCAAACTGATCTGACCTGGTTGTACTGCGGtgacccctcctcctcttcctatagCTCCGTGCTCATATTACACATGTACCATTACTATAACCACAACTATGGCCCCTACAGCAAatcattttatgtgtgtgtgtgcatgtgcttgtTTGTGCGTGGCAAACTTTGGGCAGTGAATCACATGGTCCTGTTTCCTGAGCCCATCTTTTCATGTTTATTCCCATGATGATCACATGACCATTGGGTCAGGTCCTCTAAGGTTATTTTGGTGGTTTTTCTAACGTTTTTCTAGTGTTTTTCTTCAGTTTTTCTAGTGTGCTTGAATTCACTCCAGTATATAAGTTTCAGGGCAAGTGGGGCAGAGCCCCAcgtgttttgagccccacatttttagcaaaaataaataaataatcatttgta
>TU2174452
agccattattttgagcagtcctcccctcagcagcctccgctTGAACCGCACGTAGTGGTACTTAATTGGCAGACCTAGACTCTGTCACACCGAACGAGCCGAGACGTCCAACAATCGTTTACGACCTAAAAATTTGCCCAAGACGTGGACAGTTTGTCTGGGACTGCAAAATCGCTGCATAAAAGTGCTAAAATCGCACCGTCTACAATGGTCCACACTGGTAGCTgctttcatgtgttttctgtagCAGCCCCCAGGGGAACTCTCATAGTAAAGGATAGGCAGAATGATGAGAAATGTACATGTGCGTTCTGCATTGtatctctgagtgatgtgaaaGGTCTGCCTCTCTTACAGGAAGTGGATATTGGCCTAGCAGCTGACGTTGGCACTCTGCAGCGCCTACCTAAAGTCATTGGACGACAAATctgacatgtaaaaaaaaaattgaatgaaTTATTCACTGAAACAAGAGTTCATTCAGTCTCTCTTTCCTTCGGTCTTCAGGCAACGTGGAACATGAGCATGCTGCAGACGGAGGATGTCATGAAGTCAGCTGTGGCCGCCATGGAGAAGAAAAGTCCTAAAACAATAGCTTTCTCCAGGCTCTGAAGCTGAGCTGCAGAAAGAGGCCGGAGTTCAACTTTTCTTAGCCGATGGAAAGTCGGGGGGAGAAGGGgaatggatggaggggtggtgtAGAAAGTTAAAGGAATTCCTTTATCTACTTAACCGGAGTCAAATGAACTAGTGTTACCATTGTTATGTCTCTGCGTCCAGTATAATGGAAGTTAGATGTAGTTTGGGGTGTTGGCGCTAGATTTCCAGTCTTTGCGCTAAGCTAGTTAGCGTTGGCTCGCGTAGATACCTcataacttccttcatactggacggaGAGACAtgcaaatggtatccacgagttcatctgactctgggcaGTTTGATAAAGGGCCATTGCCAAAATTCTCAATTATCAatttaaacaaatgtaaaaatgCTCTCTTGCCTCCTGACTGCATATGTTTGTGTGTTGGTGCCTTTTTGTCTGTATGAATCACCCAAAGCAGAGCTGTCTGTAAagatgtgttgttgtcctctcttGCTGGCTCTGCATGCAGGATTCAGGTTGGATACTCTACCAACCACCCTTCACACTCTTGCAAATGTACATAAATGATTGCATCATAAAAATAGAAATGAAC

Function

symbol description
prss16 Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Orthologous to human PRSS16 (serine protease 16).

NR:

description
delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961067.1 False 2218 mRNA 0.53 15 10129892 10139994
TU2174452 True 1202 lncRNA 0.45 1 10137566 10138767

Neighbor

gene id symbol gene type direction distance location
LOC110503704 LOC106612609 coding downstream 15644 10104566 ~ 10114248 (-)
LOC110503698 LOC107388308 coding downstream 117488 10009361 ~ 10012404 (-)
LOC110503700 LOC107388308 coding downstream 120905 10005340 ~ 10008987 (-)
LOC110503696 LOC106612616 coding downstream 145850 9979013 ~ 9984042 (-)
LOC110503694 NA coding downstream 188124 9924311 ~ 9941768 (-)
LOC110503705 hnrnpl coding upstream 3034 10143028 ~ 10153094 (-)
LOC110503706 LOC105026808 coding upstream 12296 10152290 ~ 10159142 (-)
LOC110503317 LOC106612604 coding upstream 20900 10160894 ~ 10263430 (-)
LOC118944110 NA coding upstream 147114 10287108 ~ 10301655 (-)
LOC110503707 LOC106612603 coding upstream 163048 10303042 ~ 10351767 (-)
G1901162 NA non-coding downstream 486 10128930 ~ 10129406 (-)
G1901147 LOC106612610 non-coding downstream 29326 10096286 ~ 10100566 (-)
G1901146 NA non-coding downstream 36995 10092560 ~ 10092897 (-)
G1901144 LOC106612610 non-coding downstream 38635 10090983 ~ 10091257 (-)
G1901212 NA non-coding upstream 79429 10219423 ~ 10223013 (-)
G1901251 NA non-coding upstream 135847 10275841 ~ 10276160 (-)
G1901258 NA non-coding upstream 143194 10283188 ~ 10283398 (-)
G1901072 LOC107388308 other downstream 117538 10005372 ~ 10012354 (-)
LOC110503680 LOC106612628 other downstream 555743 9570867 ~ 9579939 (-)
G1899875 NA other downstream 2081918 8046779 ~ 8047974 (-)
LOC110503590 LOC106612705 other downstream 3669827 6371958 ~ 6472758 (-)
LOC118944082 NA other downstream 3898084 6181377 ~ 6231808 (-)
G1901206 NA other upstream 65226 10205220 ~ 10205948 (-)
G1901302 LOC106612600 other upstream 259048 10399042 ~ 10399857 (-)
G1901405 NA other upstream 476930 10616924 ~ 10617481 (-)
G1901516 NA other upstream 713837 10853831 ~ 10856437 (-)
LOC110503734 rnf7 other upstream 775560 10915471 ~ 10918092 (-)

Expression


Co-expression Network