Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944011 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 10205598 ~ 10228708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039298.1 | False | 689 | mRNA | 0.54 | 3 | 10205598 | 10216193 |
| XR_005039299.1 | True | 577 | mRNA | 0.56 | 3 | 10205598 | 10228708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944010 | NA | coding | upstream | 44667 | 10158220 ~ 10160931 (+) |
| LOC110503702 | LOC106612610 | coding | upstream | 107920 | 10079483 ~ 10097678 (+) |
| si:ch1073-228b5.2 | atp5sl | coding | upstream | 126903 | 10075372 ~ 10078695 (+) |
| LOC110503701 | LOC106612612 | coding | upstream | 143688 | 10028287 ~ 10061910 (+) |
| LOC110503697 | LOC106612613 | coding | upstream | 179841 | 10015851 ~ 10025757 (+) |
| LOC110503709 | LOC106612599 | coding | downstream | 144425 | 10373133 ~ 10395848 (+) |
| LOC110503711 | LOC106580858 | coding | downstream | 167258 | 10395966 ~ 10402123 (+) |
| LOC110503712 | LOC106612598 | coding | downstream | 182043 | 10410751 ~ 10427770 (+) |
| LOC110503716 | LOC106580865 | coding | downstream | 314873 | 10543581 ~ 10560319 (+) |
| LOC110503719 | LOC106612592 | coding | downstream | 342663 | 10571371 ~ 10579935 (+) |
| G1898675 | LOC106612604 | non-coding | upstream | 39078 | 10160947 ~ 10166520 (+) |
| G1898680 | NA | non-coding | upstream | 52874 | 10152023 ~ 10152724 (+) |
| G1898676 | LOC105006371 | non-coding | upstream | 56594 | 10145115 ~ 10149004 (+) |
| G1898710 | NA | non-coding | upstream | 76050 | 10129259 ~ 10129548 (+) |
| G1898791 | NA | non-coding | downstream | 53040 | 10281748 ~ 10282184 (+) |
| G1898797 | NA | non-coding | downstream | 71063 | 10299771 ~ 10300091 (+) |
| G1898828 | NA | non-coding | downstream | 138322 | 10367030 ~ 10367540 (+) |
| G1898835 | NA | non-coding | downstream | 150163 | 10378871 ~ 10379207 (+) |
| G1898545 | LOC106612623 | other | upstream | 356259 | 9848472 ~ 9849339 (+) |
| G1898441 | NA | other | upstream | 615907 | 9588040 ~ 9589691 (+) |
| G1898293 | LOC106612633 | other | upstream | 680052 | 9519932 ~ 9525546 (+) |
| G1898315 | cep164 | other | upstream | 761541 | 9443294 ~ 9444057 (+) |
| G1898300 | NA | other | upstream | 846434 | 9357051 ~ 9359164 (+) |
| G1898772 | NA | other | downstream | 74474 | 10303182 ~ 10304418 (+) |
| G1898883 | NA | other | downstream | 259145 | 10487853 ~ 10488334 (+) |
| G1898930 | NA | other | downstream | 355407 | 10584115 ~ 10584449 (+) |
| LOC118944016 | LOC106931471 | other | downstream | 502288 | 10730732 ~ 10758090 (+) |
