Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503711 |
| gene name | LOC106580858 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 10395966 ~ 10402123 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dystrophia myotonica WD repeat-containing protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021582185.2 | False | 3998 | mRNA | 0.52 | 4 | 10395966 | 10402122 |
| TU2171827 | True | 1689 | lncRNA | 0.45 | 3 | 10400123 | 10402123 |
10,393,000
10,394,000
10,395,000
10,396,000
10,397,000
10,398,000
10,399,000
10,400,000
10,401,000
10,402,000
10,403,000
10,404,000
10,405,000
10,406,000
10,407,000
10,408,000
10,409,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503709 | LOC106612599 | coding | upstream | 118 | 10373133 ~ 10395848 (+) |
| LOC118944011 | NA | coding | upstream | 167258 | 10205598 ~ 10228708 (+) |
| LOC118944010 | NA | coding | upstream | 235035 | 10158220 ~ 10160931 (+) |
| LOC110503702 | LOC106612610 | coding | upstream | 298288 | 10079483 ~ 10097678 (+) |
| si:ch1073-228b5.2 | atp5sl | coding | upstream | 317271 | 10075372 ~ 10078695 (+) |
| LOC110503712 | LOC106612598 | coding | downstream | 8629 | 10410751 ~ 10427770 (+) |
| LOC110503716 | LOC106580865 | coding | downstream | 141459 | 10543581 ~ 10560319 (+) |
| LOC110503719 | LOC106612592 | coding | downstream | 169249 | 10571371 ~ 10579935 (+) |
| LOC110503720 | ercc2 | coding | downstream | 180268 | 10582390 ~ 10594857 (+) |
| LOC110503723 | LOC106612591 | coding | downstream | 230949 | 10633071 ~ 10636790 (+) |
| G1898835 | NA | non-coding | upstream | 16759 | 10378871 ~ 10379207 (+) |
| G1898828 | NA | non-coding | upstream | 28426 | 10367030 ~ 10367540 (+) |
| G1898797 | NA | non-coding | upstream | 95875 | 10299771 ~ 10300091 (+) |
| G1898791 | NA | non-coding | upstream | 113782 | 10281748 ~ 10282184 (+) |
| G1898675 | LOC106612604 | non-coding | upstream | 229446 | 10160947 ~ 10166520 (+) |
| G1898844 | NA | non-coding | downstream | 26772 | 10428894 ~ 10429320 (+) |
| G1898846 | NA | non-coding | downstream | 27408 | 10429530 ~ 10430070 (+) |
| G1898852 | LOC106580861 | non-coding | downstream | 44193 | 10446315 ~ 10446727 (+) |
| G1898853 | NA | non-coding | downstream | 45461 | 10447583 ~ 10447799 (+) |
| G1898857 | NA | non-coding | downstream | 49899 | 10452021 ~ 10452376 (+) |
| G1898772 | NA | other | upstream | 91548 | 10303182 ~ 10304418 (+) |
| G1898545 | LOC106612623 | other | upstream | 546627 | 9848472 ~ 9849339 (+) |
| G1898441 | NA | other | upstream | 806275 | 9588040 ~ 9589691 (+) |
| G1898293 | LOC106612633 | other | upstream | 870420 | 9519932 ~ 9525546 (+) |
| G1898315 | cep164 | other | upstream | 951909 | 9443294 ~ 9444057 (+) |
| G1898883 | NA | other | downstream | 85731 | 10487853 ~ 10488334 (+) |
| G1898930 | NA | other | downstream | 181993 | 10584115 ~ 10584449 (+) |
| LOC118944016 | LOC106931471 | other | downstream | 328874 | 10730732 ~ 10758090 (+) |
| G1901545 | NA | other | downstream | 469536 | 10871658 ~ 10872906 (+) |
