LOC110503739


Basic Information

Item Value
gene id LOC110503739
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 11026931 ~ 11029263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039312.1
TAAACCAgcaattagctagttagctaacccTGCTGGAGAATAGTATGGTTTAAAATTCTAAAATTATTTATCAAGTGATGACTAATCTGGAATAGTGTAATTTCGAAACTAGTTAGCTATTTCAACACAATTAACTTCAGCAGCTAACCAACACACGGAGACAACTTCCTGCCACGAGCGTTTCGCAAAATGAGAACAGAGACGCGAGGTAGCCACAGTTTGGATGGTGGATTGCTTATCCAAGACTATTCAGGACATTCACAGGGACAGAGGGAATACAGGATGTTAAATCTGAATCAacttgaagctgggatgtccctTCTACCATTTAATTCGCTCTCccgactgtccatcaactcctggctgaaccctacATCAGATCCACTGACAAAGTGCACACCTGCAATCCTTACATCATAACGCAGCAGAAGAGAGGGGTTTCATCACAATAGCACATTCAAAGATCGATTTATAGCGATTAATCTAAAATAATTCATAGATTTTAAACAAGTCTATTTCTGTTTGTCATAGATGGACAAATGTAATATGATATTAATAGAGCTCTGTTTGACGTTCACAGCGCTGGGGGCAAATGTTTTGATCAAGACTGACCCTTAGAAAATATGCACATTCTCTAACCATAGAgatatgtattttacagttataagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039312.1 True 669 mRNA 0.39 3 11026931 11029263

Neighbor

gene id symbol gene type direction distance location
LOC110503736 fa70b coding upstream 55917 10931879 ~ 10971014 (+)
LOC110503318 LOC106612575 coding upstream 170440 10827276 ~ 10856491 (+)
LOC110503730 bcl7b coding upstream 210656 10813213 ~ 10816275 (+)
LOC118944016 LOC106931471 coding upstream 268841 10730732 ~ 10758090 (+)
LOC110503725 LOC106612733 coding upstream 317131 10706207 ~ 10709800 (+)
LOC118944017 NA coding downstream 10974 11040237 ~ 11044659 (+)
trip12 NA coding downstream 19373 11048636 ~ 11106085 (+)
LOC110503319 LOC100380637 coding downstream 83154 11112417 ~ 11192759 (+)
LOC110503743 pid1 coding downstream 166422 11195685 ~ 11232556 (+)
LOC110503320 LOC106612570 coding downstream 344170 11373433 ~ 11413851 (+)
G1901606 NA non-coding upstream 36540 10989946 ~ 10990391 (+)
G1901605 NA non-coding upstream 38481 10983933 ~ 10988450 (+)
G1901604 NA non-coding upstream 44263 10982328 ~ 10982668 (+)
G1901550 LOC106601083 non-coding upstream 146248 10880278 ~ 10880683 (+)
G1901546 NA non-coding upstream 153584 10873078 ~ 10873347 (+)
G1901635 NA non-coding downstream 9923 11039186 ~ 11039506 (+)
G1901641 NA non-coding downstream 31587 11060850 ~ 11069010 (+)
G1901654 NA non-coding downstream 79996 11109259 ~ 11109511 (+)
G1901655 NA non-coding downstream 80637 11109900 ~ 11110272 (+)
G1901545 NA other upstream 154025 10871658 ~ 10872906 (+)
G1898930 NA other upstream 442482 10584115 ~ 10584449 (+)
LOC110503716 LOC106580865 other upstream 477119 10543581 ~ 10560319 (+)
G1898883 NA other upstream 538597 10487853 ~ 10488334 (+)
LOC110503322 LOC106612564 other downstream 547688 11494038 ~ 11583941 (+)
G1902710 NA other downstream 1283312 12312575 ~ 12313457 (+)
G1903192 NA other downstream 1509458 12538721 ~ 12544378 (+)
G1903195 LOC106591448 other downstream 1513097 12542360 ~ 12547857 (+)

Expression

LOC110503739 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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LOC110503739 Expression in each Bioproject

Bar chart with 19 bars.
LOC110503739 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 10.
End of interactive chart.

Co-expression Network