LOC110503319 (LOC100380637)


Basic Information

Item Value
gene id LOC110503319
gene name LOC100380637
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 11112417 ~ 11192759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961640.1
GCTCGCTTGCTCAGTCGCAGTGCACACAGCCAGTCTACAGCATCCCTACCAGCCTgcctctcacactcacacactctccatTCAGCTCcctcacccacaaacacagataGCAGAGCGACCAGCAGCTTACTCACTGAGCCAGAGCTAAGAGGAACAGAGAGCGCAGAGAGGGAGTGACAAATAAGGTTTATACGTACATAAGAGAAGATGAGGATGCCTGTGGCCGCGCAGCgccccctctacctcctcctgctTCTGCTGAGTGCCGGGGGTGGGGGTTTCTCCTCCCCCCTTGATCTGGAGCCCCCTGCTCCGGAGGCGGCTGCCCCGGCTGAGGCTGACCCCACCCAGGCCACTCCCCTGCCTGACCCCTGCGAGGGACGGCCCTGTCTCAACGGAGGTGCCTGCTCGGCCCAACCCTCCGacccagagacagaggacactctGCCCAACACCTGGGCTTACAGCTGCACCTGCACCTCCGGCTTCTCCGGACGCAACTGTGAGTTTTTCACAGACCCCTGTGCCAGCAGCCCCTGTTTCCATGGCAACTGTAGCCGCAGTGGTGAGGGCGAGGCTTACACCTGCGAGTGCAGCGAGGGGTACAAGGGGGAGAAGTGTGAGCAAGCCACCTTGGACCTGCTGCCTGTCTCCAATTGGGACCCTGCCACACCCGCCATGCCCACAACCGCCCCTCAACCCTCCCAGCCAACCATGGTGTCCACTACAACGCAGGCCCCTCCCACGCTGCAGCCGTGGCAGCCTAAGGCTGGACAGAGACTCTTGGTGGTGCAGTGGGAGAAAGAACAGGTGACAGAGGGACTGCATTGTGTGAGTCCTGAGCTGTGTGAGCTGACCTCTGgaactctgactctctctctagaGGTGCCTGAGGAGACTGCCATCAAgaTTGTGGTGAATGTGAGTGGCGCTCCCGTCCTGTGGCGTGTTGACAAGGATGGCTTCCAGCATTCCTCCTTGGTGGAGGGGACCATCATGTGGTTCCAGCAGGTCTCAGATGGACTGGTGGTCCCTGACCACTCCCTCCCCCTGGGACACAACTACTTCCTCAGTGTGTTGCGCATGGGTGCCCCCAGTGGCTCGGAGGTCACCCTGCGTCTCAATCTGACAGTGAAGGCCAGCAGCTGTGTGGAGCCTGGCAGCCGCTTCAGCGACCCACAATGCTCTGGGAAGGGGAAGTGCATCACTCAGCCCTCTGTGAGCACCTTCTTCTGTGAGTGTGAGGATGGTTACTCTGGGATATTCTGTGAGGAGTTTGATGCCTGCCGCCTCAGGCCCTGCCAGAACTACGCCATCTGTAGTGACTTGAGGCAGGGGGACGAGGGCCGTAACTTCACTTGTATCTGCCCCCCAGGGTTCCAGGGTGATCTTTGCCAGTTGCAGGTGGACCACTGCCTGTCTCAGCCCTGCAGAAACGGTGCTACCTGCTCCAGCAGCCTGGCAGGACCCAGGTGCTACTGCCCTGAGGGGTATCAGGGCAGTATGTGTGAACAGAGGGTGGACCCATGTGCCTCCAGCCCCTGCCACAACAACGGGAGCTGCTTCCCCCAGGGTCCCGGCCTGGACTTTGGCTGCAGCTGTGCTGCCGGCTTCACCGGCCCAACCTGTGCCCAGCTGGTGGACTTCTGTGCCCTCAACCCCTGTGCCCATGGGATCTGCCGCAGTGTGGGCACCAGCTACAGATGTCTGTGTGTCCCAGGGTACCATGGTCTGTACTGTGAGGAAGAATACAACGAGTGTTTGTCAGCCCCCTGCCAGAACTACGCTACCTGCAGAGACCTCATCAACGCTTACGAATGTGTCTGCACTCCCCAGTATGAAGGCAGACACTGTGAGATCTACAGGGATCCTTGTCTGAAGGCTCACTGTCAGAACGGAGGACGCTGTGATAGTGTGGGCCTGAACGCCACCTGTGTCTGCCCAACTGGTTACCTGGGGGAGGACTGTGAGGTTGATGTCAACGAGTGTGAGAGCAACCCCTGTCATCACGGTGGAACCTGCATCGACCAATCAAATGCCTACACCTGCCACTGCCCCCCAGGCTGGATAGGGGCCAGCTGTGAGATACacttGCAGTGGAAGACGGCCCACCCTGAGGACACCCTGACCAACATGCCACGTCACTCCCTCTACATCATCATCGGTGCCCTGTGCGTGGCCTTCGTCCTCATGCTCATCATCCTCATCGTGGGCATCTGCCGCATCAGCCGCATCGAGTACCAGGGCTCATCTCGCCATGCCTACCAGGAGTTCTACAACTGCCGCAGCATCGACAGCGAGTTCAGCAACGCCATCGCCTCCATCCGCCACGCCAGATTTGGGAAGAAGTCCCGGCCAGCCATGTACGACGCCGCACCCATCACCTACGAGGACTACAGCCCTGACGACAAGCCCCTGGTCACTTTGATCAAAACAAAAGATTTGTAGAAAACACAGAGGcagcacacccacccacacacagtatcacgcatcacctgttcacacacacaaCTAACTGGACATGTTCGGATGTGCACCAATACACACAAATTCAGTCAATGCAAACCATTTAGTATTTCTTTACATAAACATTGAAAAAATAAATGTGGACAAAACAATAGTCCTGCGGGAAGAAAAATACAAATCTATTTTACGGTTGGAATATCCATAAAGCTACTGTAGCATAAGAGCGCACCTTGCATTATGCTACTTCTCTCCAGTAGAATGTGACTACATTACCCAGGATGCCATTGGGGTCCTAAAGGGGGCGGTTCCTGACATCCCCCACCAACCCATGAGCTCAGTTTAAAGTGTAGATTCAGCAGAGGCTGCTGATAGGAGTTCTTACAGGTGTGGTAGAAATAGGTGCACTTGTCATAGTGCAgtacgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatctttctatATAAAAAATCTGCAGTAGGTTGCCTTACTTGATGCATGGGTAGATTTGATGGTTTCTGCATAATTTTGAAACCTGTACATTGTGATTGATTTACTGTATCTTTACCAGGTTTGTGCCAAAATCGTCTCCTTCTTCAGGCAACAACGTGTGGTAGAAGTAGAACAGACGTAAAAACCACTATGGGGGAAGCTTTAAAACAgtgttttaaaaaaacaaacattggttgtcatgtttttgttatttacAAGTTCTGTACAAGTAAAGAAGGAGAAATAATTGTATTCACAGTGTTGTATGGTTTCCCTATATGAGGACAGTGTTTTTCGCAGGAGTGGTCGGAGTAGCCAATGGGCGGGTCTTGTGTGGATGACTGACAGGTGGGGAGGGCGGGTCTTGTGTGGATGATTGACAGGTCAGCTGGTGAGTCTGCTCCAGCAACATGTGCTTCTGTGTCCCAGGTAtaggtgtctctctctgtctgtgtgcggTTGTGTTGTTCCACTCAGGGTCAACCCCTGGGTGGATTGGTTTTGGGGCGCCGGATGGGCGGAAcattttagaccattccattggttCTTAATGTAATCTCTGCCCACCCAGAGCACTGAGTGAGCTCTCCACTTGACTGATGTTTAGCCAACTAGGATCATTGTCCTTTTTCTAAAAGAGAAGAACCACATGAGTATTATCTATGTTCAATGATGTAACAATAAAGATTGAAGTGAACACAAACCCA

Function

NR:

description
delta and Notch-like epidermal growth factor-related receptor

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K24463 DNER; delta and Notch-like epidermal growth factor-related receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961640.1 True 3703 mRNA 0.53 13 11112417 11192759

Neighbor

gene id symbol gene type direction distance location
trip12 NA coding upstream 6332 11048636 ~ 11106085 (+)
LOC118944017 NA coding upstream 67758 11040237 ~ 11044659 (+)
LOC110503739 NA coding upstream 83154 11026931 ~ 11029263 (+)
LOC110503736 fa70b coding upstream 141403 10931879 ~ 10971014 (+)
LOC110503318 LOC106612575 coding upstream 255926 10827276 ~ 10856491 (+)
LOC110503743 pid1 coding downstream 2926 11195685 ~ 11232556 (+)
LOC110503320 LOC106612570 coding downstream 180674 11373433 ~ 11413851 (+)
LOC110503321 LOC106580908 coding downstream 236417 11429176 ~ 11431291 (+)
LOC110503746 LOC106612519 coding downstream 240696 11433455 ~ 11436687 (+)
LOC110503745 LOC106612569 coding downstream 243985 11436744 ~ 11453186 (+)
G1901655 NA non-coding upstream 2145 11109900 ~ 11110272 (+)
G1901654 NA non-coding upstream 2906 11109259 ~ 11109511 (+)
G1901641 NA non-coding upstream 43407 11060850 ~ 11069010 (+)
G1901635 NA non-coding upstream 72911 11039186 ~ 11039506 (+)
G1901971 NA non-coding downstream 79440 11272199 ~ 11272443 (+)
G1901972 NA non-coding downstream 79977 11272736 ~ 11273055 (+)
G1902058 NA non-coding downstream 227829 11420588 ~ 11422240 (+)
G1902063 NA non-coding downstream 236078 11428837 ~ 11429067 (+)
G1902064 NA non-coding downstream 236723 11429482 ~ 11429797 (+)
G1901545 NA other upstream 239511 10871658 ~ 10872906 (+)
LOC118944016 LOC106931471 other upstream 354733 10730732 ~ 10758090 (+)
G1898930 NA other upstream 527968 10584115 ~ 10584449 (+)
LOC110503716 LOC106580865 other upstream 562605 10543581 ~ 10560319 (+)
LOC110503322 LOC106612564 other downstream 384192 11494038 ~ 11583941 (+)
G1902710 NA other downstream 1119816 12312575 ~ 12313457 (+)
G1903192 NA other downstream 1345962 12538721 ~ 12544378 (+)
G1903195 LOC106591448 other downstream 1349601 12542360 ~ 12547857 (+)
LOC110503782 LOC106612540 other downstream 1679464 12858737 ~ 12881204 (+)

Expression

LOC110503319(LOC100380637) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC110503319(LOC100380637) Expression in each Bioproject

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LOC110503319(LOC100380637) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1250.
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Co-expression Network