daw1 (daw1)


Basic Information

Item Value
gene id daw1
gene name daw1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 11413847 ~ 11428873 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961327.1
GGAACAAGTTCTGTCTTTTTTGAACAGGTTAGTTGTAGGCGAATGCGTTTCAGTCCATCTGCGCATGCGTTTTGGCCGCGATAGTCTGTCGCCATAACAACGCTTTGTTGACAAGTGATTTCTGCTGGAGAAGCGAAATGAAACTCAAACGATTCCTTCTCAGATATTATCCACCAGGTATCATCCTGGAATATGAGAAAGGAGGAGCTCTGAAGACTAAATCCATCGATCTGTTGGATTTGTCTCCGGAGACAGACACCGAGGAGTTAATATCAGCGATCAGGAAATCGGAGCCACTGATCACAGCATCACGCGTCGACCAAGTCAAACTCTTGATCGTCAGACTGCAGGAGAAACTGGGTCAGCAGGACAACCGCAGATTCTCTCTCTTCAAGGCGCTGCAGGCGCACATACTGCCACTGACAAACGTTGCCTTCAATAAATCAGGGTCGAGtTTTATAACTGGGAGCTATGACAGGACATGTAAAATATGGGACACGGCGTCAGGCGAGGAGCTGCACACACTGGAGGGCCACAGGAACGTGGTGTATGCCATCGCCTTCAACAACCCCTATGGGGACAAGATTGCCACTGGGTCCTTTGATAAGACCTGCAGACTGTGGAGTGTAGAGACGGGCAAATGTTTCCACACCTTCCGAGGACACACTGCTGAAATAGTGTGTTTGGCGTTTAACCCTCAAAGTACCTTGGTGGCCACGGGTAGCATGGACACTACGGCCAAGCTATGGGACATCCAGACTGGAGAGGAGGTGTCCACACTGACAGGCCACTCAGCAGAGATCATCTCCTTGTCATTTAACACAGTGGGTGACCAGCTAGTCACTGGCTCCTTTGACCACACTGTTTCTCTGTGGGATGTTCCATCTGGGAGGCGTGTCCACACACTGATAGGCCACAGAGGGGAGATCAGCAGTGTTCAGTTTAACTGGGACTGCTCCCTCATCATCACCGGCTCCATGGACAAAAGTTGTAGGGTGTGGGAGGCAGCGAGTGGGAAGTGTATGGCCACACTAGCAGGCCATGAAGACGAGGTGCTGGATGTGTGTTTCGACTACACCGGTCAACTCATAGCCACCGCCTCGGCTGACGGCACAGCGAGAGTGTACAGCGCTGTCAGCTACCAGTGCATCTCCAGACTGGAGAGCCATGAGGGAGAGATCTCCAAGATCTGTTTTAACGCTCAGGGCAGTAGAGTTCTGACGGCCAGCGCTGACAAGACGGCTCGCCTGTGGGACGTCCAGTCTGGCGTCTGTCTGCAGGTCCTCGAGGGACACACGGACGAGATCTTCTCCTCTGCCTTCAACTACGAGGGTGACACCATCATCACAGGCAGCAAGGACAACACCTGTCGCATCTGGCGCTGACCCATCCTGTGGTCAGTGGTCAGTAGGGTGTGTGAGGAAGGGAAGGCCATCTGTCCATCCACCAACAAAGAAGATAACTCCAACAGGGCCCCGATTGAAGATGCCCTTCCTGGAAGTTATTACTGACCCAACGTATGTGACCTCTAACCTCCTAGTTGCTGTGGAGTAAGATACAGGAGAACGGATAGCTTTGGTGAATGGATTTGGTCCCACTGTCATTTTACTATGTAGGACTGTCTAGACAGACAGTTTAGTGCTGTGGATGCATCCCAATGGCACCCAATCTCTAttaagtgcactacttctgagcaGGGCCTATAGGGCTTTGCGGCCTGCATTCAACAGTTAGGATTTGACCTGGACTGGTCACTTTGGTCCTCTGTCATGTTCAGTGTTGATActcagtgtttgtttgtgtgttaatTGTAGAATGGGCTGGACGGAATAATGTTTTCTCTACCCCTCTTTTGCTCAATAAAGTCTATTCATGCTCaca
>XM_036961328.1
ATGGAACAAGTTCTGTCTTTTTTGAACAGGTTAGTTGTAGGCGAATGCGTTTCAGTCCATCTGCGCATGCGTTTTGGCCGCGATAGTCTGTCGCCATAACAACGCTTTGTTGACAAGTGATTTCTGCTGGAGAAGCGAAATGAAACTCAAACGATTCCTTCTCAGATATTATCCACCAGGTATCATCCTGGAATATGAGAAAGGAGGAGCTCTGAAGACTAAATCCATCGATCTGTTGGATTTGTCTCCGGAGACAGACACCGAGGAGTTAATATCAGCGATCAGGAAATCGGAGCCACTGATCACAGCATCACGCGTCGACCAAGTCAAACTCTTGATCGTCAGACTGCAGGAGAAACTGGGTCAGCAGGACAACCGCAGATTCTCTCTCTTCAAGGCGCTGCAGGCGCACATACTGCCACTGACAAACGTTGCCTTCAATAAATCAGGGTCGAGtTTTATAACTGGGAGCTATGACAGGACATGTAAAATATGGGACACGGCGTCAGGCGAGGAGCTGCACACACTGGAGGGCCACAGGAACGTGGTGTATGCCATCGCCTTCAACAACCCCTATGGGGACAAGATTGCCACTGGGTCCTTTGATAAGACCTGCAGACTGTGGAGTGTAGAGACGGGCAAATGTTTCCACACCTTCCGAGGACACACTGCTGAAATAGTGTGTTTGGCGTTTAACCCTCAAAGTACCTTGGTGGCCACGGGTAGCATGGACACTACGGCCAAGCTATGGGACATCCAGACTGGAGAGGAGGTGTCCACACTGACAGGCCACTCAGCAGAGATCATCTCCTTGTCATTTAACACAGTGGGTGACCAGCTAGTCACTGGCTCCTTTGACCACACTGTTTCTCTGTGGGATGTTCCATCTGGGAGGCGTGTCCACACACTGATAGGCCACAGAGGGGAGATCAGCAGTGTTCAGTTTAACTGGGACTGCTCCCTCATCATCACCGGCTCCATGGACAAAAGTTGTAGGGTGTGGGAGGCAGCGAGTGGGAAGTGTATGGCCACACTAGCAGGCCATGAAGACGAGGTGCTGGATGTGTGTTTCGACTACACCGGTCAACTCATAGCCACCGCCTCGGCTGACGGCACAGCGAGAGTGTACAGCGCTGTCAGCTACCAGTGCATCTCCAGACTGGAGAGCCATGAGGGAGAGATCTCCAAGGGCAGTAGAGTTCTGACGGCCAGCGCTGACAAGACGGCTCGCCTGTGGGACGTCCAGTCTGGCGTCTGTCTGCAGGTCCTCGAGGGACACACGGACGAGATCTTCTCCTCTGCCTTCAACTACGAGGGTGACACCATCATCACAGGCAGCAAGGACAACACCTGTCGCATCTGGCGCTGACCCATCCTGTGGTCAGTGGTCAGTAGGGTGTGTGAGGAAGGGAAGGCCATCTGTCCATCCACCAACAAAGAAGATAACTCCAACAGGGCCCCGATTGAAGATGCCCTTCCTGGAAGTTATTACTGACCCAACGTATGTGACCTCTAACCTCCTAGTTGCTGTGGAGTAAGATACAGGAGAACGGATAGCTTTGGTGAATGGATTTGGTCCCACTGTCATTTTACTATGTAGGACTGTCTAGACAGACAGTTTAGTGCTGTGGATGCATCCCAATGGCACCCAATCTCTAttaagtgcactacttctgagcaGGGCCTATAGGGCTTTGCGGCCTGCATTCAACAGTTAGGATTTGACCTGGACTGGTCACTTTGGTCCTCTGTCATGTTCAGTGTTGATActcagtgtttgtttgtgtgttaatTGTAGAATGGGCTGGACGGAATAATGTTTTCTCTACCCCTCTTTTGCTCAATAAAGTCTATTCATGCTCaca

Function

symbol description
daw1 Acts upstream of or within axonemal dynein complex assembly; cilium-dependent cell motility; and determination of left/right symmetry. Predicted to be located in cilium. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; nervous system; neural tube; and solid lens vesicle. Orthologous to human DAW1 (dynein assembly factor with WD repeats 1).

NR:

description
dynein assembly factor with WDR repeat domains 1 isoform X1

GO:

id name namespace
GO:0070286 axonemal dynein complex assembly biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0060271 cilium assembly biological_process
GO:0060285 cilium-dependent cell motility biological_process
GO:0005929 cilium cellular_component

KEGG:

id description
K19760 DAW1; dynein assembly factor with WDR repeat domains 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961327.1 False 1881 mRNA 0.51 13 11413847 11428871
XM_036961328.1 True 1865 mRNA 0.51 13 11413847 11428873

Neighbor

gene id symbol gene type direction distance location
fbxo36a LOC106612583 coding downstream 365990 11046623 ~ 11047857 (-)
LOC110503737 LOC106612576 coding downstream 368299 11034019 ~ 11045548 (-)
LOC110503738 rasa2 coding downstream 385966 10983924 ~ 11027881 (-)
shbgb shbgb coding downstream 431729 10972091 ~ 10982118 (-)
LOC110503734 rnf7 coding downstream 495965 10915471 ~ 10918092 (-)
LOC110503748 LOC106612568 coding upstream 24494 11453367 ~ 11478299 (-)
LOC110503749 LOC106612565 coding upstream 51304 11480177 ~ 11482937 (-)
LOC110503750 LOC106612566 coding upstream 54553 11483426 ~ 11488826 (-)
LOC110503751 LOC106612562 coding upstream 166321 11595194 ~ 11814542 (-)
LOC110503323 LOC106612518 coding upstream 391730 11820603 ~ 11821511 (-)
G1902093 NA non-coding downstream 141343 11272211 ~ 11272504 (-)
G1901948 NA non-coding downstream 172699 11240834 ~ 11241148 (-)
G1901927 NA non-coding downstream 206668 11195568 ~ 11207179 (-)
G1901925 NA non-coding downstream 220269 11193175 ~ 11193578 (-)
G1901922 LOC100380637 non-coding downstream 221088 11190675 ~ 11192759 (-)
G1902181 NA non-coding upstream 1261 11430134 ~ 11430370 (-)
G1902380 NA non-coding upstream 87976 11516849 ~ 11517056 (-)
G1902394 NA non-coding upstream 111993 11540866 ~ 11541201 (-)
G1902404 NA non-coding upstream 121770 11550643 ~ 11551029 (-)
G1902406 NA non-coding upstream 131455 11560328 ~ 11560638 (-)
G1901516 NA other downstream 557410 10853831 ~ 10856437 (-)
G1901405 NA other downstream 796366 10616924 ~ 10617481 (-)
G1901302 LOC106612600 other downstream 1013990 10399042 ~ 10399857 (-)
G1902875 NA other upstream 538969 11967842 ~ 12052648 (-)
LOC110503324 LOC106612555 other upstream 550938 11941794 ~ 11982431 (-)
LOC110503775 pou2af1 other upstream 1288577 12716285 ~ 12724009 (-)
rabx5 rabx5 other upstream 2287777 13716650 ~ 13719451 (-)

Expression


Co-expression Network