LOC110503750 (LOC106612566)


Basic Information

Item Value
gene id LOC110503750
gene name LOC106612566
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 11483426 ~ 11488826 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961759.1
CCGGTTTCGGTCCCCATCCATTACATTCATTCAGGGCGGCAGTGTACATTGTTGTCCCTTTCAGCTTCCTGGAATCAACATATAAGGATGCTACATCATTTGTAATGCACTCTTGAATCTTCAGCTGGACCATATCCATTTTTGCACGTATATTTAATTGATGGGAGAAGAACAAACCAAAGGCCAAATGAACGGAGCAGCATTCCCCTCTCCCACTGCAGAGATGGCGGAGATGAACCGCATCCACTACGAGCTGGAGTACACAGAGGGCATCAGCCAGCGCATGAGGATTCCAGAGATGCTCAAAATTGGCCCCTACGGTCATGACAACCCCGAGGCAGGCTCACATGACCTGCACAACGTCATGATGCAGGTCCCAGAGAGGATCGTAATGTCAGGAGACAGTGAGGACTCTCAGTTCCCCAGGCCCAGAGACCTGGACTTGATCCAGTCCACCCCGCTAGAGAGCCTGTCCCTGAAGACCCCTCCTCGGGTCCTCACCCTCAACGAGCGGCCACTGGACTTCATGGAAATGGAGCGCAGTGcagccccagcccagcccagtgagGAGGTGCGTTTGCAAGGGCGGTTGCGGCGGGAACGTTCAGCCAGCGAGAACACCACTGTCCGTCACAATGGCCAGATTGCCAGAAACGATTCAACGCTTAACCTGGCCACTCTAGACACTACTCTGGATGTTTCCATGGCTCCTGATGACATGGCTGTCGTAGATGCAGCAACGCTTCGACGTCAGATCATCAAGCTGAACCGGAGGCTCCAGCTCATAGAAGAGGAGAACAAGGAGAGGGCCAAACGTGAGATGATCATGTACTCCGTCACCGTAGCCTTCTGGCTTATCAACAGCTGGGTTTGGTTCCGCCGCTAGAATCCTTTTCTCGGAACCACTGACAGAGAGTGGAGAAcatagaagaggaggggagaggctaTGTTTCAAATGGTAGACAAATGTACTCTCTGCATTTAGCCACAGTGCTGGACAGCCTTGCTCTTGGGCAATGGGATGTTTGATTTCATTTTATTGTATACATGTACTtgtaattattttttacaatgctatattttttttgttgcttaaGAATCAAAGAATGACTCGGCTGTAAATATTTCTTCATGTTACTCAGTTGTTATCATTGCTCCTGAGGTATTTCCAACAGATAAGAGGTCTAAAGAAAATTATAACATAAGACGCATCGAAATGGGTTAAATATTTATTGGGAATTGGAATGATGTGaaaagataaaaaaataaatatatattgtgaAGCACTGCTGTTATATTGTAAGATAATACATAATGTAAAATTGACTAATGGTTTTAATTGATGTATAGTACTGCAAGGAAATATAAAGTCACACTGTTGCTATTACACTATTcattatgttattattatttattgattATGTATGGCCCATATCCACCAAGCCATAAGCATGATATGCTTTTTCTCATATTTTATCTTCAGTTACTACCTTTTTTGTTTTACCAAGTACTTTCTGGCTGAAGCACAATGTTATCAAATTGGTTGTAGTTTTCAGTTGTAATGTACCAGCATATTATGCTGAGAGTCATGCAATTTTATTGGAATAAATGACAAAATAGCTAATTTGGA
>XM_036961758.1
TCCGGTTTCGGTCCCCATCCATTACATTCATTCAGGGCGGCAGTGTACATTGTTGTCCCTTTCAGCTTCCTGGAATCAACATATAAGGATGCTACATCATTTGTAATGCACTCTTGAATCTTCAGCTGGACCATATCCATTTTTGCACGTATATTTAATTGATGGGAGAAGAACAAACCAAAGGCCAAATGAACGGAGCAGCATTCCCCTCTCCCACTGCAGAGATGGCGGAGATGAACCGCATCCACTACGAGCTGGAGTACACAGAGGGCATCAGCCAGCGCATGAGGATTCCAGAGATGCTCAAAATTGGCCCCTACGGTCATGACAACCCCGAGGCAGGCTCACATGACCTGCACAACGTCATGATGCAGGTCCCAGAGAGGATCGTAATGTCAGGAGACAGTGAGGACTCTCAGTTCCCCAGGCCCAGAGACCTGGACTTGATCCAGTCCACCCCGCTAGAGAGCCTGTCCCTGAAGACCCCTCCTCGGGTCCTCACCCTCAACGAGCGGCCACTGGACTTCATGGAAATGGAGCGCAGTGcagccccagcccagcccagtgagGAGGTGCGTTTGCAAGGGCGGTTGCGGCGGGAACGTTCAGCCAGCGAGAACACCACTGTCCGTCACAATGGCCAGATTGCCAGAAACGATTCAACCAAGCCGTCACTGCGAGGGGGGTCTGCCTCGACCTCTAACCCCCTGCATGAATCCAGGCTTAACCTGGCCACTCTAGACACTACTCTGGATGTTTCCATGGCTCCTGATGACATGGCTGTCGTAGATGCAGCAACGCTTCGACGTCAGATCATCAAGCTGAACCGGAGGCTCCAGCTCATAGAAGAGGAGAACAAGGAGAGGGCCAAACGTGAGATGATCATGTACTCCGTCACCGTAGCCTTCTGGCTTATCAACAGCTGGGTTTGGTTCCGCCGCTAGAATCCTTTTCTCGGAACCACTGACAGAGAGTGGAGAAcatagaagaggaggggagaggctaTGTTTCAAATGGTAGACAAATGTACTCTCTGCATTTAGCCACAGTGCTGGACAGCCTTGCTCTTGGGCAATGGGATGTTTGATTTCATTTTATTGTATACATGTACTtgtaattattttttacaatgctatattttttttgttgcttaaGAATCAAAGAATGACTCGGCTGTAAATATTTCTTCATGTTACTCAGTTGTTATCATTGCTCCTGAGGTATTTCCAACAGATAAGAGGTCTAAAGAAAATTATAACATAAGACGCATCGAAATGGGTTAAATATTTATTGGGAATTGGAATGATGTGaaaagataaaaaaataaatatatattgtgaAGCACTGCTGTTATATTGTAAGATAATACATAATGTAAAATTGACTAATGGTTTTAATTGATGTATAGTACTGCAAGGAAATATAAAGTCACACTGTTGCTATTACACTATTcattatgttattattatttattgattATGTATGGCCCATATCCACCAAGCCATAAGCATGATATGCTTTTTCTCATATTTTATCTTCAGTTACTACCTTTTTTGTTTTACCAAGTACTTTCTGGCTGAAGCACAATGTTATCAAATTGGTTGTAGTTTTCAGTTGTAATGTACCAGCATATTATGCTGAGAGTCATGCAATTTTATTGGAATAAATGACAAAATAGCTAATTTGGA
>XM_021582254.2
TTCCGGTTTCGGTCCCCATCCATTACATTCATTCAGGGCGGCAGTGTACATTGTTGTCCCTTTCAGCTTCCTGGAATCAACATATAAGGATGCTACATCATTTGTAATGCACTCTTGAATCTTCAGCTGGACCATATCCATTTTTGCACGTATATTTAATTGATGGGAGAAGAACAAACCAAAGGCCAAATGAACGGAGCAGCATTCCCCTCTCCCACTGCAGAGATGGCGGAGATGAACCGCATCCACTACGAGCTGGAGTACACAGAGGGCATCAGCCAGCGCATGAGGATTCCAGAGATGCTCAAAATTGGCCCCTACGGTCATGACAACCCCGAGGCAGGCTCACATGACCTGCACAACGTCATGATGCAGGTCCCAGAGAGGATCGTAATGTCAGGAGACAGTGAGGACTCTCAGTTCCCCAGGCCCAGAGACCTGGACTTGATCCAGTCCACCCCGCTAGAGAGCCTGTCCCTGAAGACCCCTCCTCGGGTCCTCACCCTCAACGAGCGGCCACTGGACTTCATGGAAATGGAGCGCAGTGcagccccagcccagcccagtgagGAGGTGCGTTTGCAAGGGCGGTTGCGGCGGGAACGTTCAGCCAGCGAGAACACCACTGTCCGTCACAATGGCCAGATTGCCAGAAACGATTCAACTGTGACCCCGTTCCCCCCAGCCCCTCTTCGCGTCTTCCCCCCTCTCGCCATGGCCGAGGACGAACAGAACCTGTACAGCGCTAGCGGCGTTCTCTCTTTCATCCAGTCCACCACGCGCCGGGCCTACCAGCAGGTCTTGGAGGTTCTGGACGAGAACCACCGCAGCAAGCCGTCACTGCGAGGGGGGTCTGCCTCGACCTCTAACCCCCTGCATGAATCCAGGCTTAACCTGGCCACTCTAGACACTACTCTGGATGTTTCCATGGCTCCTGATGACATGGCTGTCGTAGATGCAGCAACGCTTCGACGTCAGATCATCAAGCTGAACCGGAGGCTCCAGCTCATAGAAGAGGAGAACAAGGAGAGGGCCAAACGTGAGATGATCATGTACTCCGTCACCGTAGCCTTCTGGCTTATCAACAGCTGGGTTTGGTTCCGCCGCTAGAATCCTTTTCTCGGAACCACTGACAGAGAGTGGAGAAcatagaagaggaggggagaggctaTGTTTCAAATGGTAGACAAATGTACTCTCTGCATTTAGCCACAGTGCTGGACAGCCTTGCTCTTGGGCAATGGGATGTTTGATTTCATTTTATTGTATACATGTACTtgtaattattttttacaatgctatattttttttgttgcttaaGAATCAAAGAATGACTCGGCTGTAAATATTTCTTCATGTTACTCAGTTGTTATCATTGCTCCTGAGGTATTTCCAACAGATAAGAGGTCTAAAGAAAATTATAACATAAGACGCATCGAAATGGGTTAAATATTTATTGGGAATTGGAATGATGTGaaaagataaaaaaataaatatatattgtgaAGCACTGCTGTTATATTGTAAGATAATACATAATGTAAAATTGACTAATGGTTTTAATTGATGTATAGTACTGCAAGGAAATATAAAGTCACACTGTTGCTATTACACTATTcattatgttattattatttattgattATGTATGGCCCATATCCACCAAGCCATAAGCATGATATGCTTTTTCTCATATTTTATCTTCAGTTACTACCTTTTTTGTTTTACCAAGTACTTTCTGGCTGAAGCACAATGTTATCAAATTGGTTGTAGTTTTCAGTTGTAATGTACCAGCATATTATGCTGAGAGTCATGCAATTTTATTGGAATAAATGACAAAATAGCTAATTTGGA

Function

NR:

description
mitochondrial fission factor-like

GO: NA

KEGG:

id description
K22076 MFF; mitochondrial fission factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961759.1 False 1630 mRNA 0.44 6 11483426 11488824
XM_036961758.1 False 1688 mRNA 0.44 7 11483426 11488825
XM_021582254.2 True 1854 mRNA 0.46 8 11483426 11488826

Neighbor

gene id symbol gene type direction distance location
LOC110503749 LOC106612565 coding downstream 489 11480177 ~ 11482937 (-)
LOC110503748 LOC106612568 coding downstream 5127 11453367 ~ 11478299 (-)
daw1 daw1 coding downstream 54553 11413847 ~ 11428873 (-)
fbxo36a LOC106612583 coding downstream 435569 11046623 ~ 11047857 (-)
LOC110503737 LOC106612576 coding downstream 437878 11034019 ~ 11045548 (-)
LOC110503751 LOC106612562 coding upstream 106368 11595194 ~ 11814542 (-)
LOC110503323 LOC106612518 coding upstream 331777 11820603 ~ 11821511 (-)
LOC110503324 LOC106612555 coding upstream 452969 11941794 ~ 11982431 (-)
LOC118944095 LOC106612537 coding upstream 533844 12022670 ~ 12024891 (-)
LOC118936592 LOC106612536 coding upstream 537776 12026602 ~ 12059103 (-)
G1902181 NA non-coding downstream 53056 11430134 ~ 11430370 (-)
G1902093 NA non-coding downstream 210922 11272211 ~ 11272504 (-)
G1901948 NA non-coding downstream 242278 11240834 ~ 11241148 (-)
G1901927 NA non-coding downstream 276247 11195568 ~ 11207179 (-)
G1901925 NA non-coding downstream 289848 11193175 ~ 11193578 (-)
G1902380 NA non-coding upstream 28023 11516849 ~ 11517056 (-)
G1902394 NA non-coding upstream 52040 11540866 ~ 11541201 (-)
G1902404 NA non-coding upstream 61817 11550643 ~ 11551029 (-)
G1902406 NA non-coding upstream 71502 11560328 ~ 11560638 (-)
G1902415 NA non-coding upstream 82114 11570940 ~ 11571180 (-)
G1901922 LOC100380637 other downstream 290667 11190675 ~ 11192759 (-)
LOC110503734 rnf7 other downstream 565334 10915471 ~ 10918092 (-)
G1901516 NA other downstream 626989 10853831 ~ 10856437 (-)
G1901405 NA other downstream 865945 10616924 ~ 10617481 (-)
G1902875 NA other upstream 479016 11967842 ~ 12052648 (-)
LOC110503775 pou2af1 other upstream 1228624 12716285 ~ 12724009 (-)
rabx5 rabx5 other upstream 2227824 13716650 ~ 13719451 (-)
G1904408 NA other upstream 2269002 13757828 ~ 13758644 (-)

Expression


Co-expression Network