LOC110503323 (LOC106612518)


Basic Information

Item Value
gene id LOC110503323
gene name LOC106612518
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 11820603 ~ 11821511 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581691.2
ATGAAGCGTGGGAGGGTGGTGTCATGGGCTGATATGGAGGCCATATGGAGCTATGTTTTCAACAGGCACGTGAAGACCCCCTCATGTGAGAGCCCGGTTTTACTGACTGAGTTCCCCTTGACCACCCAGTCGGACAGGGAAAAGACCTGCAGGATGATGTTCGAGGGTCTGGGTGTCCCTGCATTGTACATGGCCCCTCAGTCGCTCCTGGCCCTGCTGTCTTCAGGCAGGGTGACCGGCTGTGTGGTGGACTGTGGCTACGACGTCACCCACACCGTCCCAGTTTTCGAGGGCCACTGCCTCCCCCACGCTGTGCGTCagctgggcctgggagggcaggaTGTCACGGCCCACCTGGCTCTGCTGCTGAAGGAATCCGGAGCTCAGTTTTCCAGCACTACACAGGAACATGACACCATGACCATCATCAAGGAGCAGATGTGTTATGTATCCACTGATCCCTCCTCAGAGACAGCCACAACCATCATTGGCAGCACCGATGCGGACTACCAGCTCCCCGACGGACAGATGCTGAGGGTTGGCAGCGAGAGGTTCAGGGCACCCGaaatcctcttctctcctcagacTGTCCGCATGGTAACACAAGGCATTCCCAGTCTCCTGGTGAGCTCTGTGTTGGAGAGCGATGCAGACCTGTGGCAGCTGCTCCTAGACAACGCTGTCCTTGCCGGGGGCTCCAGCCTCCTTCCCGGGATGGGCCACAGACTGAGGGAGGAGGCCTCGGCTCTGGCCCCGCCAGGATGCCGCGTGGGGCCAGTCCCTGTGATGGACACTGCCTGGCTGGGGGGCTCCCTTCtggcctctctctccatctttggaGACATGTGCATCAGTGCCTTGGAGTACCAGGAGATGGGGTCCAACGTCATCCATCACAAGTGCTTCTGA

Function

NR:

description
actin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581691.2 True 909 mRNA 0.60 1 11820603 11821511

Neighbor

gene id symbol gene type direction distance location
LOC110503751 LOC106612562 coding downstream 6061 11595194 ~ 11814542 (-)
LOC110503750 LOC106612566 coding downstream 331777 11483426 ~ 11488826 (-)
LOC110503749 LOC106612565 coding downstream 337666 11480177 ~ 11482937 (-)
LOC110503748 LOC106612568 coding downstream 342304 11453367 ~ 11478299 (-)
daw1 daw1 coding downstream 391730 11413847 ~ 11428873 (-)
LOC110503324 LOC106612555 coding upstream 120284 11941794 ~ 11982431 (-)
LOC118944095 LOC106612537 coding upstream 201159 12022670 ~ 12024891 (-)
LOC118936592 LOC106612536 coding upstream 205091 12026602 ~ 12059103 (-)
LOC110503325 sorl1 coding upstream 476930 12298441 ~ 12371391 (-)
LOC110503763 LOC106612548 coding upstream 557393 12378904 ~ 12386064 (-)
G1902514 NA non-coding downstream 17986 11768555 ~ 11802617 (-)
G1902454 NA non-coding downstream 151503 11668885 ~ 11669100 (-)
G1902450 NA non-coding downstream 164116 11656275 ~ 11656487 (-)
G1902426 NA non-coding downstream 230166 11590191 ~ 11590437 (-)
G1902415 NA non-coding downstream 249423 11570940 ~ 11571180 (-)
G1902865 NA non-coding upstream 44035 11865546 ~ 11914530 (-)
G1902870 NA non-coding upstream 46679 11868190 ~ 11871702 (-)
G1902880 NA non-coding upstream 52300 11873811 ~ 11878500 (-)
G1902936 NA non-coding upstream 263981 12085492 ~ 12085794 (-)
G1901922 LOC100380637 other downstream 627844 11190675 ~ 11192759 (-)
LOC110503734 rnf7 other downstream 902511 10915471 ~ 10918092 (-)
G1901516 NA other downstream 964166 10853831 ~ 10856437 (-)
G1901405 NA other downstream 1203122 10616924 ~ 10617481 (-)
G1902875 NA other upstream 146331 11967842 ~ 12052648 (-)
LOC110503775 pou2af1 other upstream 895939 12716285 ~ 12724009 (-)
rabx5 rabx5 other upstream 1895139 13716650 ~ 13719451 (-)
G1904408 NA other upstream 1936317 13757828 ~ 13758644 (-)

Expression


Co-expression Network