LOC110503783


Basic Information

Item Value
gene id LOC110503783
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 12787307 ~ 12796055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470517.2
CGCACAACATTATTTTCACGATTTGGACATTAATTCGCATTCCAAagctaataaacatgtggaaatgtgAGCACTATTTGGTATTCCTAGTCGAATTAGTTAGGGAGCGTAAACAAAGTGCAAACTTTTTTACTttcgaatttcaatagctccttgtcTCAAACAAGTGTCAGAATGTCCACTGGCTACCCTTCTGTATTGCACACCCTTTGGTTTGttcattttcatctcacacgttTTTACGTGAATTGTTCAAACTTTAAAATCGAAAtggctccttggtcatgtgacctactgacttcaaacaaggttcagaatgtccactcgaAGACAATGAGGCTGCAGGCCagGTCACAGCTCTGTGGCGAAGAAACAATTGCGAGGTGGTGGTTGCTGATGTGAGGTCTACAGACAAAAAATCCTCTTTCCTTCTCCAACATTCAGAGTTTAAAACTCTGCAGCCCCACAAATGGCTTGTGGATGAGACAATCGAATGGTACTTTCAAGCCACCACAAAAAGCTGTGGTCACGGTACAAAGAGTTACACCCTAAATCATTACTCAGCCCAAGTCATTCTAAATGGAGAAAGAAGTTCAGTGTGCAAGCAAAGTCTGCCCAAGTATTTGCATGAACCATCAGGCCAAGTGTTCTTGGTTGACCCTGCTGGACAGAAAGAGAACGAGGAATCGGAACACGCTGCATTAAAATTCAGAGAATACTTCAAAATGAGAAGATCCTGCCATGGAAAAGACGACTTGGTGGACATAAAGTGGAAAGGAGGGGAAATAACTCACAACATGCAGGAGGACACCTTCAACTGCGGGGTCTTTGTAATGCAGTTGTGTGGGACAGCCATATGTTCAGTTCATGCCTGTGATGTCAGAGTTCAACAAAGCCAACAACTGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAAGACTGGATAGAATATTTTGCATGCCAACGGTGGGTCCATGTGCTGTGCCTAGGAATGAAGACAAAAGAGTTCAACAGAGTAAAGAACACAAACTGGAAGTGCagtctttgttgttgaaaatccacactgaagaggctctgaaatgtacatcaaccagggataaagagaaagTTAACACTGAAATGTTTTGTACTTTGAAGAAAAGTGTCTGACATGTTGGAAAAGATTAAAGGTCTACAATTTCCGTTTAATTTGCCAAAATAAAAATTTTATTCATTGATTTACTGGCCACCATTACTGTGGTT
>XR_002470516.2
agaagccatttcaggctatcaatcaagatAGACAAGCAAGCTactcttagctggcatgcctgttGGCAAGTTGggagactttagaaaagcaacaTTCCACATTCTCCAACTTCAGGCCAGGGGCCTAAGCTCCCTATGGACCACCCCCCCAGCCATCCTTACATACTTTGTGCCCCTCAGATTTTTTTGTGCCCATACTTTGTGCCCCTCAGATTTTGCAATCAGCCCCTGTTGGGGCTGATTGCACAGAAGGACATTGGAGGAAAGCACACTAATATGGACTATCACAAGTCGGATTTGTAACCCACAAATGTACAGGCCTGCTTGCCAGAATGTCTCATAAGGTATGAAAAGCCTCTCACgtgcaagaaagagagagaaagGTCACAGCTCTGTGGCGAAGAAACAATTGCGAGGTGGTGGTTGCTGATGTGAGGTCTACAGACAAAAAATCCTCTTTCCTTCTCCAACATTCAGAGTTTAAAACTCTGCAGCCCCACAAATGGCTTGTGGATGAGACAATCGAATGGTACTTTCAAGCCACCACAAAAAGCTGTGGTCACGGTACAAAGAGTTACACCCTAAATCATTACTCAGCCCAAGTCATTCTAAATGGAGAAAGAAGTTCAGTGTGCAAGCAAAGTCTGCCCAAGTATTTGCATGAACCATCAGGCCAAGTGTTCTTGGTTGACCCTGCTGGACAGAAAGAGAACGAGGAATCGGAACACGCTGCATTAAAATTCAGAGAATACTTCAAAATGAGAAGATCCTGCCATGGAAAAGACGACTTGGTGGACATAAAGTGGAAAGGAGGGGAAATAACTCACAACATGCAGGAGGACACCTTCAACTGCGGGGTCTTTGTAATGCAGTTGTGTGGGACAGCCATATGTTCAGTTCATGCCTGTGATGTCAGAGTTCAACAAAGCCAACAACTGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAAGACTGGATAGAATATTTTGCATGCCAACGGTGGGTCCATGTGCTGTGCCTAGGAATGAAGACAAAAGAGTTCAACAGAGTAAAGAACACAAACTGGAAGTGCagtctttgttgttgaaaatccacactgaagaggctctgaaatgtacatcaaccagggataaagagaaagTTAACACTGAAATGTTTTGTACTTTGAAGAAAAGTGTCTGACATGTTGGAAAAGATTAAAGGTCTACAATTTCCGTTTAATTTGCCAAAATAAAAATTTTATTCATTGATTTACTGGCCACCATTACTGTGGTT

Function

NR:

description
uncharacterized protein LOC110503783

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470517.2 False 1252 mRNA 0.42 7 12787307 12794824
XR_002470516.2 True 1285 mRNA 0.44 7 12787307 12796055

Neighbor

gene id symbol gene type direction distance location
LOC110503777 atf5 coding downstream 12064 12770857 ~ 12775243 (-)
LOC110503775 pou2af1 coding downstream 63298 12716285 ~ 12724009 (-)
LOC110503769 LOC106612539 coding downstream 190615 12570052 ~ 12596692 (-)
il4i1 LOC106612549 coding downstream 359319 12423276 ~ 12427988 (-)
LOC110503765 LOC106612556 coding downstream 367326 12405983 ~ 12419981 (-)
LOC118944087 LOC106612531 coding upstream 85719 12881774 ~ 12898729 (-)
LOC110503778 NA coding upstream 156629 12952684 ~ 13036439 (-)
LOC110503787 LOC106612780 coding upstream 628673 13424549 ~ 13437553 (-)
LOC110503790 LOC107702995 coding upstream 679426 13475481 ~ 13546234 (-)
LOC110503789 NA coding upstream 750282 13546337 ~ 13555170 (-)
G1903523 NA non-coding downstream 77709 12709377 ~ 12709598 (-)
G1903479 LOC106612553 non-coding downstream 78816 12704010 ~ 12708491 (-)
G1903481 NA non-coding downstream 84176 12637922 ~ 12703131 (-)
G1903452 NA non-coding downstream 176846 12610169 ~ 12610461 (-)
G1903574 LOC106612534 non-coding upstream 21134 12817189 ~ 12831695 (-)
G1903595 NA non-coding upstream 65576 12861631 ~ 12933686 (-)
G1903598 NA non-coding upstream 71658 12867713 ~ 12939238 (-)
G1903640 NA non-coding upstream 226371 13022426 ~ 13070359 (-)
G1903604 mfsd1 non-coding upstream 261048 13057103 ~ 13068432 (-)
G1902875 NA other downstream 734659 11967842 ~ 12052648 (-)
LOC110503324 LOC106612555 other downstream 806845 11941794 ~ 11982431 (-)
LOC110503748 LOC106612568 other downstream 1326260 11453367 ~ 11478299 (-)
G1901922 LOC100380637 other downstream 1594548 11190675 ~ 11192759 (-)
rabx5 rabx5 other upstream 920595 13716650 ~ 13719451 (-)
G1904408 NA other upstream 961773 13757828 ~ 13758644 (-)
G1904846 spg20 other upstream 1246915 14042970 ~ 14043449 (-)
G1904877 NA other upstream 1293667 14089722 ~ 14142728 (-)
G1904919 NA other upstream 1384008 14180063 ~ 14214520 (-)

Expression


Co-expression Network