LOC110503333 (LOC106612769)


Basic Information

Item Value
gene id LOC110503333
gene name LOC106612769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 13887519 ~ 13888439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581699.2
ATGGAAAACTCTACTCACTTTAAGGTGTTTAGGCTTGCTGCATACGGTGATATCGGACAAATGAAGTATTTCTACTTTGCTGTAGtaactgttttatattttgtcaTCATTCTTGCCAATGCTTTACTTATTGGAGTTATCTGCATTGAAAGAAGCCTTCATGAACCCATGTATCTGTTTCTATGTGCTTTGTTTGTTAATCAGTTGTATGGGAGCACTGGTTTGTTTCCTGCTCTCATGTTTTACTTGCTGTCTGACACACATGATATTTCCCTTCTTTATTGTTATCTCCAGATTTATGTGTTGTACACATATGCTATAACAGAATTTAATAATTTATCAGTTATGTCATATGACAGGTACATTTGTATTTGTTATCCTCTACAGTATAACAATATTATGACACCTAAAATAGTTTTTGGCTTAATTCTGCTGTCCTGGTTGTATTCTTTTTCCCTCAATGCCATCGTTATCTCCCTGAGTTTGCGACTGCAATTTTGTGGTAACGTTCTAGACAGACTGTATTGTGACAACTACTCAGTCGTCAAGCTTGCCTGTTCAAATACTATGCTGAATAACATATGGGGTCTTGTTGGCACTGTGCTTTCAATTTCTTGTACTATATGTCCTACCATATACTCATATGTAAAAATTCTACAAATTTGTTTAAAGTCTTCTAAAGAGACAAAACAGAAAGCATTTAACACCTGTATGCCACATATAGCCTCTTTGCTGAACTTCTCCTCTGGCTGCTTATTTGTGATTCTGCAAGGCAGATATGATACTGCACATCTTCCACCTATACTTCGCtctattttatttgtttattttctaaTATGTCCACCACTTTTCAATCCTATTATGTATGGCATTAGGATGGTTAATATCAGGCAGGCTTGTAAAAAGGTATTGAGGCTTTGA

Function

NR:

description
olfactory receptor 11A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581699.2 True 921 mRNA 0.36 1 13887519 13888439

Neighbor

gene id symbol gene type direction distance location
LOC110503330 LOC106612760 coding downstream 74926 13811652 ~ 13812593 (-)
rabx5 rabx5 coding downstream 168072 13716650 ~ 13719451 (-)
LOC110503800 LOC106612904 coding downstream 180377 13702362 ~ 13707142 (-)
LOC110503795 ppm1l coding downstream 221044 13613805 ~ 13666475 (-)
kpna4 kpna4 coding downstream 280308 13593942 ~ 13607211 (-)
LOC110503334 LOC106612769 coding upstream 6846 13895285 ~ 13896205 (-)
LOC118943997 LOC106612769 coding upstream 14600 13903039 ~ 13903959 (-)
LOC110503335 LOC106612769 coding upstream 24918 13913357 ~ 13914277 (-)
LOC110503336 LOC106612769 coding upstream 37532 13925971 ~ 13926900 (-)
LOC110503337 LOC106612770 coding upstream 49407 13937846 ~ 13938796 (-)
G1904486 NA non-coding downstream 15501 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 101322 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 146000 13741198 ~ 13741519 (-)
G1904396 NA non-coding downstream 146965 13734759 ~ 13740554 (-)
G1904393 NA non-coding downstream 157254 13730028 ~ 13730265 (-)
G1904829 ints4 non-coding upstream 123719 14012158 ~ 14012456 (-)
G1904836 NA non-coding upstream 140332 14028771 ~ 14029064 (-)
G1904838 NA non-coding upstream 142529 14030968 ~ 14031172 (-)
G1904841 NA non-coding upstream 144719 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 160004 14048443 ~ 14048751 (-)
G1904408 NA other downstream 128875 13757828 ~ 13758644 (-)
LOC110503775 pou2af1 other downstream 1163522 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1834871 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 154531 14042970 ~ 14043449 (-)
G1904877 NA other upstream 201283 14089722 ~ 14142728 (-)
G1904919 NA other upstream 291624 14180063 ~ 14214520 (-)
G1905348 NA other upstream 731224 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 733756 14622195 ~ 14655274 (-)

Expression


Co-expression Network