LOC110503334 (LOC106612769)



Basic Information


Item Value
gene id LOC110503334
gene name LOC106612769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 13895285 ~ 13896205 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021581700.2
ATGGAAAACTCTACTCACTTTAAGGTGTTTAGGCTTGCTGCATACGGTGATATCGGACAAATGAAGTATTTCTACTTTGCTGTAGtaactgttttatattttgtcaTCATTCTTGCCAATGCTTTACTTATTGGAGTTATCTGCATTGAAAGAAGCCTTCATGAACCCATGTATCTGTTTCTATGTGCTTTGTTTGTTAATCAGTTGTATGGGAGCACTGGTTTGTTTCCTGCTCTCATGTTTTACTTGCTGTCTGACACACATGATATTTCCCTTCTTTATTGTTATCTCCAGATTTATGTGTTGTACACATATGCTATAACAGAATTTAATAATTTATCAGTTATGTCATATGACAGGTACATTTGTATTTGTTATCCTCTACAGTATAACAATATTATGACACCTAAAATAGTTTTTGGCTTAATTCTGCTGTCCTGGTTGTATTCTTTTTCCCTCAATGCCATCGTTATCTCCCTGAGTTTGCGACTGCAATTTTGTGGTAACGTTCTAGACAGACTGTATTGTGACAACTACTCAGTCGTCAAGCTTGCCTGTTCAAATACTATGCTGAATAACATATGGGGTCTTGTTGGCACTGTGCTTTCAATTTCTTGTACTATATGTCCTACCATATACTCATATGTAAAAATTCTACAAATTTGTTTAAAGTCTTCTAAAGAGACAAAACAGAAAGCATTTAACACCTGTATGCCACATATAGCCTCTTTGCTGAACTTCTCCTCTGGCTGCTTATTTGTGATTCTGCAAGGCAGATATGATACTGCACATCTTCCACCTATACTTCGCtctattttatttgtttattttctaaTATGTCCACCACTTTTCAATCCTATTATGTATGGCATTAGGATGGTTAATATCAGGCAGGCTTGTAAAAAGGTATTGAGGCTTTGA

Function


NR:

description
olfactory receptor 11A1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021581700.2 True 921 mRNA 0.36 1 13895285 13896205

Neighbor


gene id symbol gene type direction distance location
LOC110503333 LOC106612769 coding downstream 6846 13887519 ~ 13888439 (-)
LOC110503330 LOC106612760 coding downstream 82692 13811652 ~ 13812593 (-)
rabx5 rabx5 coding downstream 175838 13716650 ~ 13719451 (-)
LOC110503800 LOC106612904 coding downstream 188143 13702362 ~ 13707142 (-)
LOC110503795 ppm1l coding downstream 228810 13613805 ~ 13666475 (-)
LOC118943997 LOC106612769 coding upstream 6834 13903039 ~ 13903959 (-)
LOC110503335 LOC106612769 coding upstream 17152 13913357 ~ 13914277 (-)
LOC110503336 LOC106612769 coding upstream 29766 13925971 ~ 13926900 (-)
LOC110503337 LOC106612770 coding upstream 41641 13937846 ~ 13938796 (-)
LOC110503338 LOC106612761 coding upstream 44110 13940315 ~ 13949671 (-)
G1904486 NA non-coding downstream 23267 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 109088 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 153766 13741198 ~ 13741519 (-)
G1904396 NA non-coding downstream 154731 13734759 ~ 13740554 (-)
G1904393 NA non-coding downstream 165020 13730028 ~ 13730265 (-)
G1904829 ints4 non-coding upstream 115953 14012158 ~ 14012456 (-)
G1904836 NA non-coding upstream 132566 14028771 ~ 14029064 (-)
G1904838 NA non-coding upstream 134763 14030968 ~ 14031172 (-)
G1904841 NA non-coding upstream 136953 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 152238 14048443 ~ 14048751 (-)
G1904408 NA other downstream 136641 13757828 ~ 13758644 (-)
LOC110503775 pou2af1 other downstream 1171288 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1842637 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 146765 14042970 ~ 14043449 (-)
G1904877 NA other upstream 193517 14089722 ~ 14142728 (-)
G1904919 NA other upstream 283858 14180063 ~ 14214520 (-)
G1905348 NA other upstream 723458 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 725990 14622195 ~ 14655274 (-)

Expression



Co-expression Network