LOC118943997 (LOC106612769)


Basic Information

Item Value
gene id LOC118943997
gene name LOC106612769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 13903039 ~ 13903959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961074.1
ATGGAAAACTCTACTCACTTTAAGTTCTTTAGGCTTGCTGCATACGGTGATATTGGACAAATGAAGTATTGCTACTTTGCTGTAGtaactgttttatattttgtcaTCATTCTTGCCAATGCTTTACTTATTGGAGTTATCTGCATTGAAAGAAGCCTTCATGAACCCATGTATCTGTTTCTATGTGCTTTGTTTGTTAATCAGTTGTATGGGAGCACTGGTTTGTTTCCTGCTCTCATGTTTTACTTGCTGTCTGACACACATGATATTTCCATTCTTTATTGTTATCTCCAGATTTATGTGTTGTACACATACGGTTTAACGGAATTTTGTCATTTATCAGTTATGTCATATGACAGGTACATTTGTATTTGTTATCCTCTACAGTATAACAATATTATGACACCTAAAATAGTTTTTGGCTTAATTCTACTGTCCTGGTTGTATTCTTTTTTCCTCAATGCCATCGTTATCTCCCTGAGTTTGCGACTGCAATTTTGTGGTAACATTCTAGACAGACTGTATTGTGACAACTACTCAGTCGTCAAGCTTGCCTGTTCAAATACTACGCTGAATGACATATGGGGTCTTGTTGGCACTGTGCTTTCTATTTCTTGTACTATATGTCCTACCATATACTCATATGTAAAAATTCTACAAATTTGTTTAAAGTCTTCTAAAGAGACGAAACAGAAAGCATTTAATACCTGTATGCCACATATAGCCTCTTTGCTGAACTTCTCCTCTGGCTGCTTATTTGTGATTCTGCAAGGCAGATATGATACTGCACATCTTCCACCTATACTTCGCTCTATTTTATTCGTTTATTTTCTAATATGTCCACCACTTTTCAATCCTATTATGTATGGCATTAGGATGGCTAAAATCAGGCAGGCTTGTAAAAAGGTTTTGAGGCTTTGA

Function

NR:

description
olfactory receptor 11A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961074.1 True 921 mRNA 0.36 1 13903039 13903959

Neighbor

gene id symbol gene type direction distance location
LOC110503334 LOC106612769 coding downstream 6834 13895285 ~ 13896205 (-)
LOC110503333 LOC106612769 coding downstream 14600 13887519 ~ 13888439 (-)
LOC110503330 LOC106612760 coding downstream 90446 13811652 ~ 13812593 (-)
rabx5 rabx5 coding downstream 183592 13716650 ~ 13719451 (-)
LOC110503800 LOC106612904 coding downstream 195897 13702362 ~ 13707142 (-)
LOC110503335 LOC106612769 coding upstream 9398 13913357 ~ 13914277 (-)
LOC110503336 LOC106612769 coding upstream 22012 13925971 ~ 13926900 (-)
LOC110503337 LOC106612770 coding upstream 33887 13937846 ~ 13938796 (-)
LOC110503338 LOC106612761 coding upstream 36356 13940315 ~ 13949671 (-)
LOC110503339 LOC106612769 coding upstream 55044 13959003 ~ 13959988 (-)
G1904486 NA non-coding downstream 31021 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 116842 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 161520 13741198 ~ 13741519 (-)
G1904396 NA non-coding downstream 162485 13734759 ~ 13740554 (-)
G1904393 NA non-coding downstream 172774 13730028 ~ 13730265 (-)
G1904829 ints4 non-coding upstream 108199 14012158 ~ 14012456 (-)
G1904836 NA non-coding upstream 124812 14028771 ~ 14029064 (-)
G1904838 NA non-coding upstream 127009 14030968 ~ 14031172 (-)
G1904841 NA non-coding upstream 129199 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 144484 14048443 ~ 14048751 (-)
G1904408 NA other downstream 144395 13757828 ~ 13758644 (-)
LOC110503775 pou2af1 other downstream 1179042 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1850391 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 139011 14042970 ~ 14043449 (-)
G1904877 NA other upstream 185763 14089722 ~ 14142728 (-)
G1904919 NA other upstream 276104 14180063 ~ 14214520 (-)
G1905348 NA other upstream 715704 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 718236 14622195 ~ 14655274 (-)

Expression


Co-expression Network