LOC110503335 (LOC106612769)


Basic Information

Item Value
gene id LOC110503335
gene name LOC106612769
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 13913357 ~ 13914277 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581701.2
ATGGAAAACTCTACTCCCTTTAAGTTCTTTAGGCTTGCTGCATACGGTGATATCGGACAAATGAAGTATTGCTACTTTGCTGTAGtaactgttttatattttgtcaTCATTCTTGCCAATGCTTTACTTATTGGAGTTATCTGCATTGAAAGAAGCCTTCATGAACCCATGTATCTGTTTCTATGTGCTTTGTTTGTTAATCAGTTATATGGGAGCACTGGTTTGTTTCCTGCTCTCATGTTTTACTTGCTGTCTGACACACATGATATTTCCCTTCTTTATTGTTATCTCCAGATTTATGTGTTGTACACATATGCTATAACAGAATTTAGTAATTTATCAGTTATGTCATATGACAGGTACATTTGTATTTGTTATCCTCTACAGTATAACAATATTATGACACCTAAAATAGTTTTTGGCTTAATTCTACTGTCCTGGTTGTATTCTTTTTTCCTCAATGCCATCGTTATCTCCCTGAGTTTGCGACTGCAATTTTGTGGTAACATTCTAGACAGAGTGTATTGTGACAACTACTCAGTCGTCAAGCTTGCCTGTTCAAATACTATGCTGAATAACATATGGGGTCTTGTTTGCACTGTGCTTTCTTTTTCTTGTACTATATGTCCTACCATATACTCATATGTAAAAATTCTACAAATTTGTTTAAAGTCTTCTAAAGAGACGAAACAGAAAGCATTTAACACCTGTATGCCACATATAGCCTCTTTGCTGAACTTCTCCTCTGGCTGCTTATTTGTGATTCTACAAGGCAGATATGATACTGCACATCTTCCACCTATACTTCGCACAATTTTATTAGTTTATTTTCTAATATGTCCACCACTTTTCAATCCTATTATGTATGGCATTAGGATGGCTAAAATCAGGCAGGCTTGTAAAAAGGTATTGAGGCTTTGA

Function

NR:

description
olfactory receptor 11A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581701.2 True 921 mRNA 0.35 1 13913357 13914277

Neighbor

gene id symbol gene type direction distance location
LOC118943997 LOC106612769 coding downstream 9398 13903039 ~ 13903959 (-)
LOC110503334 LOC106612769 coding downstream 17152 13895285 ~ 13896205 (-)
LOC110503333 LOC106612769 coding downstream 24918 13887519 ~ 13888439 (-)
LOC110503330 LOC106612760 coding downstream 100764 13811652 ~ 13812593 (-)
rabx5 rabx5 coding downstream 193910 13716650 ~ 13719451 (-)
LOC110503336 LOC106612769 coding upstream 11694 13925971 ~ 13926900 (-)
LOC110503337 LOC106612770 coding upstream 23569 13937846 ~ 13938796 (-)
LOC110503338 LOC106612761 coding upstream 26038 13940315 ~ 13949671 (-)
LOC110503339 LOC106612769 coding upstream 44726 13959003 ~ 13959988 (-)
LOC110503340 LOC106612760 coding upstream 58084 13972361 ~ 13973550 (-)
G1904486 NA non-coding downstream 41339 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 127160 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 171838 13741198 ~ 13741519 (-)
G1904396 NA non-coding downstream 172803 13734759 ~ 13740554 (-)
G1904393 NA non-coding downstream 183092 13730028 ~ 13730265 (-)
G1904829 ints4 non-coding upstream 97881 14012158 ~ 14012456 (-)
G1904836 NA non-coding upstream 114494 14028771 ~ 14029064 (-)
G1904838 NA non-coding upstream 116691 14030968 ~ 14031172 (-)
G1904841 NA non-coding upstream 118881 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 134166 14048443 ~ 14048751 (-)
G1904408 NA other downstream 154713 13757828 ~ 13758644 (-)
LOC110503775 pou2af1 other downstream 1189360 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1860709 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 128693 14042970 ~ 14043449 (-)
G1904877 NA other upstream 175445 14089722 ~ 14142728 (-)
G1904919 NA other upstream 265786 14180063 ~ 14214520 (-)
G1905348 NA other upstream 705386 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 707918 14622195 ~ 14655274 (-)

Expression


Co-expression Network