aamdc (aamdc)


Basic Information

Item Value
gene id aamdc
gene name aamdc
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 14015443 ~ 14019214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582342.2
aagtagatgtcctgactgatttgccaaaactatagttaacaatacatttgtggagtggttgaaaaatgagttttaatgactcaagctaagtgtaagtaaacttctgacttcaactgtatattcactTTTATTACTCTAAATACACGTGGAACTGCATGAAAATCATGCATGTCACACATTGGCCCCATTTATTAATTGAAAGACCCAGAACTGTTATTTTTACATGTGGTGCATGCAGAATTGAGAAGTCATTTTTTAGTCCAGAAATATACTTTCTGGGCCCGGAAGCCAGCTTGTGATGCATGTTTTTGTGGATAaacagaaaatatatatatatatttttattatcaAATACGTTTGCAGCATCATTGTTTCCCCTTTCGACAGTGTACACATTGGCTGACATTAGTGACGTAACAGGAGGAATGGGAACCTAAAGGCAGTCTAATAGCCGTTTGGGGGAACGGGAGTGACTCACACACAACTTAAAAGTACACgtagaaatacatttttaaaaataaagtaaatgGTTATTGGATGAACTCGGTGGGACAAACAGCCATTGCTTCAAACGTTCAGTTACAATTCACCTTAACCAGTCCACATTTTGTCATCGCCACGTTCAGCAGGAGAGACAACGTTCTTACGTTCATATAGAAATGTATGATATAGAACCAATATACTTCTCTGGTATGTAGAGTAAGTAATCACATCAGCTAATTGAATATCTATCCGCAACGTTCCACAACGCTGAGGTATCAGCTACTTAACCTAACGATCCGGAACACACCCCTTTACGAAAGTAGCACAGGCTGCCTACGAGGCAACGAACTGTTAACCGCTGCGTTGGTTTCCAAACGTGCCTGCAGCAGCCGAGACACAACATCTGACCTATGTCGTCGCCAGAGATCGCTTCCCTGTCCTGGGGACACATGAAGGTGAAGGGCTGCTCCTCTTCCTATAAGGACTGTAAGGTGTGGCCCGGGGGTAGCCGCGCAtgggactggagagagactgggacggatCATCACCCTGGAGTGCAGCCTGCAGATCTGGAGGAGGTGCTTCAGAAGGGTGTGGCGACTCTGGTCATCGGGCGGGGCATGAATGAGGCGCTGCAGGTCCCGTCCTCAACTGTGGACTTcgtgagacagagaggagtggagCTGATAGTTCTGCAGACAGAGAAGGCCATCACAGAATACAACAACCTGGTTGGCCAGGGAGCCAAGGTGGGTGGCATCTTCCACTCTACCTGCTGATGACATCATACTACAGGTGGCCAGTAGGAGAACTCTGAAAGCCTGGTGCGATTCAACATGTCATATTCATTACAGCACAtcatagcaaaatgttttgcaatggacAAGTCcatgtagtccctccctgtttggtgCCTGATGAACACAAACCTGGGGTGCATTAGCGAAGTGAAACATTCAGAACACCGTAATGAAGAGCTAAAATGACTTGCTGTGAATAAAGGCTTGTTTTTGTCA
>XM_021582343.2
aagtagatgtcctgactgatttgccaaaactatagttaacaatacatttgtggagtggttgaaaaatgagttttaatgactcaagctaagtgtaagtaaacttctgacttcaactgtatattcactTTTATTACTCTAAATACACGTGGAACTGCATGAAAATCATGCATGTCACACATTGGCCCCATTTATTAATTGAAAGACCCAGAACTGTTATTTTTACATGTGGTGCATGCAGAATTGAGAAGTCATTTTTTAGTCCAGAAATATACTTTCTGGGCCCGGAAGCCAGCTTGTGATGCATGTTTTTGTGGATAaacagaaaatatatatatatatttttattatcaAATACGTTTGCAGCATCATTGTTTCCCCTTTCGACAGTGTACACATTGGCTGACATTAGTGACGTAACAGGAGGAATGGGAACCTAAAGGCAGTCTAATAGCCGTTTGGGGGAACGGGAGTGACTCACACACAACTTAAAAGTACACgtagaaatacatttttaaaaataaagtaaatgGTTATTGGATGAACTCGGTGGGACAAACAGCCATTGCTTCAAACGTTCAGTTACAATTCACCTTAACCAGTCCACATTTTGTCATCGCCACGTTCAGCAGGAGAGACAACGTTCTTACGTTCATATAGAAATGTATGATATAGAACCAATATACTTCTCTGGTATGTAGAGTAAGTAATCACATCAGCTAATTGAATATCTATCCGCAACGTTCCACAACGCTGAGGTATCAGCTACTTAACCTAACGATCCGGAACACACCCCTTTACGAAAGTAGCACAGGCTGCCTACGAGGCAACGAACTGCAGCCGAGACACAACATCTGACCTATGTCGTCGCCAGAGATCGCTTCCCTGTCCTGGGGACACATGAAGGTGAAGGGCTGCTCCTCTTCCTATAAGGACTGTAAGGTGTGGCCCGGGGGTAGCCGCGCAtgggactggagagagactgggacggatCATCACCCTGGAGTGCAGCCTGCAGATCTGGAGGAGGTGCTTCAGAAGGGTGTGGCGACTCTGGTCATCGGGCGGGGCATGAATGAGGCGCTGCAGGTCCCGTCCTCAACTGTGGACTTcgtgagacagagaggagtggagCTGATAGTTCTGCAGACAGAGAAGGCCATCACAGAATACAACAACCTGGTTGGCCAGGGAGCCAAGGTGGGTGGCATCTTCCACTCTACCTGCTGATGACATCATACTACAGGTGGCCAGTAGGAGAACTCTGAAAGCCTGGTGCGATTCAACATGTCATATTCATTACAGCACAtcatagcaaaatgttttgcaatggacAAGTCcatgtagtccctccctgtttggtgCCTGATGAACACAAACCTGGGGTGCATTAGCGAAGTGAAACATTCAGAACACCGTAATGAAGAGCTAAAATGACTTGCTGTGAATAAAGGCTTGTTTTTGTCA

Function

symbol description
aamdc Predicted to be involved in positive regulation of fat cell differentiation. Predicted to be active in cytoplasm. Orthologous to human AAMDC (adipogenesis associated Mth938 domain containing).

NR:

description
mth938 domain-containing protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582342.2 False 1499 mRNA 0.45 4 14015443 14019214
XM_021582343.2 True 1464 mRNA 0.44 4 14015443 14019214

Neighbor

gene id symbol gene type direction distance location
rps3 LOC106612898 coding downstream 13714 13996252 ~ 14001729 (-)
LOC118944122 NA coding downstream 15766 13999529 ~ 13999677 (-)
LOC118944120 NA coding downstream 16503 13998794 ~ 13998940 (-)
LOC118944121 NA coding downstream 17248 13998047 ~ 13998195 (-)
LOC118944123 NA coding downstream 18697 13996600 ~ 13996746 (-)
LOC110503806 LOC106612897 coding upstream 2766 14021980 ~ 14026047 (-)
LOC110503343 LOC106612894 coding upstream 52572 14071786 ~ 14401799 (-)
LOC110503811 stard13 coding upstream 385547 14404761 ~ 14519627 (-)
LOC110503815 dus14 coding upstream 528503 14547717 ~ 14549440 (-)
LOC110503814 LOC106612890 coding upstream 547802 14567016 ~ 14585375 (-)
G1904829 ints4 non-coding downstream 2987 14012158 ~ 14012456 (-)
G1904486 NA non-coding downstream 143425 13871593 ~ 13872018 (-)
G1904423 NA non-coding downstream 229246 13781341 ~ 13786197 (-)
G1904398 NA non-coding downstream 273924 13741198 ~ 13741519 (-)
G1904396 NA non-coding downstream 274889 13734759 ~ 13740554 (-)
G1904836 NA non-coding upstream 9557 14028771 ~ 14029064 (-)
G1904838 NA non-coding upstream 11754 14030968 ~ 14031172 (-)
G1904841 NA non-coding upstream 13944 14033158 ~ 14033476 (-)
G1904852 NA non-coding upstream 29229 14048443 ~ 14048751 (-)
G1904408 NA other downstream 256799 13757828 ~ 13758644 (-)
rabx5 rabx5 other downstream 295992 13716650 ~ 13719451 (-)
LOC110503775 pou2af1 other downstream 1291446 12716285 ~ 12724009 (-)
G1902875 NA other downstream 1962795 11967842 ~ 12052648 (-)
G1904846 spg20 other upstream 23756 14042970 ~ 14043449 (-)
G1904877 NA other upstream 70508 14089722 ~ 14142728 (-)
G1904919 NA other upstream 160849 14180063 ~ 14214520 (-)
G1905348 NA other upstream 600449 14619663 ~ 14621372 (-)
G1905324 LOC106612883 other upstream 602981 14622195 ~ 14655274 (-)

Expression

aamdc(aamdc) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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aamdc(aamdc) Expression in each Bioproject

Bar chart with 21 bars.
aamdc(aamdc) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network