LOC110503830 (LOC106612876)


Basic Information

Item Value
gene id LOC110503830
gene name LOC106612876
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 14839172 ~ 14873526 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582380.2
AGAAAGGAACGGTGGATGTATGATCTGTCTTCTACATTGCCAGTGTGGTTTCTACAGCCAGATCCCATTTCTCAGTGTTTCTGTGTACCTGGAGGAGCTTCCTGGGATATCATCATGAAGATCCTGTTTGCAGCTCTCTTTTCTGTGTTTGTCCTGTCTAACTTTGACATGGCGGACTCCTCTTCTTATGATAAGATAGTCTACCACAGTAAAGTCAGGGCAAGAAAAGAGGGACCCAACGTGTGCGCTCTGCAGCAGGCCATGGGGACCAAGAAGAAGTATTTCAGCACGTGTCGTAATTGGTATCAAGGGGCCATCTGTGGAAAGAAAGCGACGGTGCTGTATGAGTGCTGTCCAGGGTACATGAAGCTGGACGGAATGAAAGGATGTCCTGCAGTGGCCCCTATAGACAATGTGTATGGTACCTTGGGCCTGGTCAAGGCCATCTCCACCCAGGAATACTCTCACATCTCCAAGCTGCGGGAGGAGATAGAGGGATCTGGGTCATACACCTTCTTCGCTCCCAGCAACGATGCTTGGGACTTGTTAGAAGAGGAAGTGCGTAGCGCGTTGGTGAGCAACGTGAACATTGAGCTGTACAATGCTCTGCACTACCACATGGCTAACAAACGCCTGCTGACCAAAGACCTGAAGAACGGCCTGGTGGTCGACTCCATGTACAACGACCTGGGACTCTACATCAACCACTACTCCAACGGGttatgtatgaagaTCGTGACGGTGAACTGTGCCAGGATTATCCATGGCAACCAGGTTGCCACCAACGGGGTGGTGCACATCATCGACCGTGTCATCACTGCCGTGGGCAACACCATCCAGGATGTCATCGAGGTTGACGATGACCTCACCACTCTCAGTGAAGTGGCTCTGGCCTCAGGCCTGCTGGACAAGCTGGGACAACCCGGCCAGTACACCCTGTTCGCCCCCACCAACGATGCCTTCGCGAAGCTGGACTCAGACGTGCTTCAACGACTGATGGGTGACAAGGGTGTCCTCCAAGctctgCTGAACTTCCACATGCTGAACTCTGTCCAGTGTTCAGAGGGCATCATGTCCGGCCAGACCTTTGAGACCCTGGAAGGCCACAACATCGAGATTGGCTGTGACGGGGACAGCCTGACGGTCAACGGCATCAAAATGGTGTTGAAGAAAGACATTGTCACCGCCAACGGAGTCATCCACCTCATCGACGAGGTCCTCATGCCTGACTCAGCCAAGCAGGTGATGGAGCTGCTCACCCCTTCCCAGTCCACCTTCAGTGACATGGTGTCAGAGCTAGGTCTTTCTGCAGCCATGGCAGCTGAGGCAGAATACACACTACTGGCTCCTCTCAATTCTGTCTTCACTGATGAGGTGATGGCCATTGACCAGAACTTTCTGAAGGTGATTCTGGAGAACCACATCCTGAAGGAGAAGATCACTCTGGGACAGCTGTACAACGGACAGCGCCTGGAGACTATCGCCGGGAAGTTCCTCAGAGTCTTCATCTACCGCACagcgGTGTGCATAGAGAACTCCTGCCTGGTGCGCGGCAGCAAGGAGGGCAGTAACGGAGCCCTCCACCTGATGAAGACTCTGATGAAGCCAGCTGAGGCCACCATGTTCCAGATCCTCACTGACAACGGAGGATTCAAGATCTTCCTGTCACTGATGGAGATGGCTGGTCTGACTGACCTGCTCAAACAGGAAGGAGAATACACTCTGTTCGCTCCCAGTGATGAGGCCTTCGCTGGTGTCAGCGACAGTGACATGGCTCTGCTCAGAGGTAATATGAATGCCCTGCGTACCATCCTGCTCTACCACTTCAGTAACGGAGTGTTCATCGGCGGAGGTTTGGAGACTGGGGTGACCAACCTCCTCAAGTCTCTGCAGGGAAACAACCTCCGAGTGCTGCATgctAACAACACAATTAGAGTGAACACTATTGAGGTCCctgaaaatgatatcatggccaCTAACGGAGTCATTCACTTTGTCAAAACCCTCCTCTACCCCGGAGAGCTGCCTGCTGGAAACTCTGACCTTCTGGGGCTGCTGAGAAGACTCATCAAGTACATGGAGATCAAGTTTGTGTCAGGATACAGATATAAGGAAATCCCTCTCACATTCATGAAGAGGACGATCGTCACACGCGTCATTGAGTCAGcGCCTGATGTGACCCACGTGACTAGGGTTATCGAAAGGGAACCTACTATCACCAAGGTGACCAGGGTGATTGAGGGACAGCCTACCATCACCAAGGTGACTAGAGTCATTGAAGGCGAGCCAAAGTTCACCAAGGTCACTAGAGTCATCGAGGGAGAGCCCAAGGTCACCAAAGTTACCAGAGTGGTCTCAGGTCCTCAGTACTCGGCCAGCAGCAGTGGCTCCAGCAGTGGTATCTCCAACATTGAGCTGGAAGGTGCTGACTTCTCCCGTATCACCACCATCGAGGGAAACCCCTCAATGCTCGACATGGACTCTGAAAAAATCACCAAGTTCATCCAAGAGGGAAACCCGAGACGAGTAACTGGCAGGAAAATTCCAGCTGGTGCCAGGAGGAGAGTCAGACCAGAGGAACAAAGAGCATAAACATGGACAGACCAGGTGACTAAAGATGCACCAGCAACCAGAGAGGAACAACAGAGATAATGTCAATGAATGGTCTCCCATAAAAGCTCTACACTCCAAATGATGCGTGTGTAGACATACAGAACTTGAACTTAGTGAGACCAGTAAAGCCATTtgctaaacaaaacaaaaatcatTGATGCATGTATCTAAAGATAACTAAAAGCCATCAAGATATGTAAATAGCGTACGCATATTTGTGGGTTTTCGGTGTATATTAGAGATGAAAGATTAGAAGCTAGCCAGGGGTAGCAAAATAATCTTTGAAACCAATCTTTTGAAAGCCTCGACCATTGGTTGAGGTGATACAACAGGATTTTTAGGAAGATTTTGTAATTTACCTCTGCATGATATCGAGTTTGTGGTGctcacataaaaataaaaataataaaaaataaaatgtgattgcTGTTTTCTGACAGTGACTTCATTTCTGCAAATGTTTATATTTTTCTACCAGATGTAATTTCAGCTCTGATCTGAGTTTCACAGTAGTGtgtttgctctctctttctgcctttctgtctgactgtctacctAGCTAACCATAAAGATATTGAGTTTG
>XM_021582381.2
AGAAAGGAACGGTGGATGTATGATCTGTCTTCTACATTGCCAGTGTGGTTTCTACAGCCAGATCCCATTTCTCAGTGTTTCTGTGTACCTGGAGGAGCTTCCTGGGATATCATCATGAAGATCCTGTTTGCAGCTCTCTTTTCTGTGTTTGTCCTGTCTAACTTTGACATGGCGGACTCCTCTTCTTATGATAAGATAGTCTACCACAGTAAAGTCAGGGCAAGAAAAGAGGGACCCAACGTGTGCGCTCTGCAGCAGGCCATGGGGACCAAGAAGAAGTATTTCAGCACGTGTCGTAATTGGTATCAAGGGGCCATCTGTGGAAAGAAAGCGACGGTGCTGTATGAGTGCTGTCCAGGGTACATGAAGCTGGACGGAATGAAAGGATGTCCTGCAGTGGCCCCTATAGACAATGTGTATGGTACCTTGGGCCTGGTCAAGGCCATCTCCACCCAGGAATACTCTCACATCTCCAAGCTGCGGGAGGAGATAGAGGGATCTGGGTCATACACCTTCTTCGCTCCCAGCAACGATGCTTGGGACTTGTTAGAAGAGGAAGTGCGTAGCGCGTTGGTGAGCAACGTGAACATTGAGCTGTACAATGCTCTGCACTACCACATGGCTAACAAACGCCTGCTGACCAAAGACCTGAAGAACGGCCTGGTGGTCGACTCCATGTACAACGACCTGGGACTCTACATCAACCACTACTCCAACGGGaTCGTGACGGTGAACTGTGCCAGGATTATCCATGGCAACCAGGTTGCCACCAACGGGGTGGTGCACATCATCGACCGTGTCATCACTGCCGTGGGCAACACCATCCAGGATGTCATCGAGGTTGACGATGACCTCACCACTCTCAGTGAAGTGGCTCTGGCCTCAGGCCTGCTGGACAAGCTGGGACAACCCGGCCAGTACACCCTGTTCGCCCCCACCAACGATGCCTTCGCGAAGCTGGACTCAGACGTGCTTCAACGACTGATGGGTGACAAGGGTGTCCTCCAAGctctgCTGAACTTCCACATGCTGAACTCTGTCCAGTGTTCAGAGGGCATCATGTCCGGCCAGACCTTTGAGACCCTGGAAGGCCACAACATCGAGATTGGCTGTGACGGGGACAGCCTGACGGTCAACGGCATCAAAATGGTGTTGAAGAAAGACATTGTCACCGCCAACGGAGTCATCCACCTCATCGACGAGGTCCTCATGCCTGACTCAGCCAAGCAGGTGATGGAGCTGCTCACCCCTTCCCAGTCCACCTTCAGTGACATGGTGTCAGAGCTAGGTCTTTCTGCAGCCATGGCAGCTGAGGCAGAATACACACTACTGGCTCCTCTCAATTCTGTCTTCACTGATGAGGTGATGGCCATTGACCAGAACTTTCTGAAGGTGATTCTGGAGAACCACATCCTGAAGGAGAAGATCACTCTGGGACAGCTGTACAACGGACAGCGCCTGGAGACTATCGCCGGGAAGTTCCTCAGAGTCTTCATCTACCGCACagcgGTGTGCATAGAGAACTCCTGCCTGGTGCGCGGCAGCAAGGAGGGCAGTAACGGAGCCCTCCACCTGATGAAGACTCTGATGAAGCCAGCTGAGGCCACCATGTTCCAGATCCTCACTGACAACGGAGGATTCAAGATCTTCCTGTCACTGATGGAGATGGCTGGTCTGACTGACCTGCTCAAACAGGAAGGAGAATACACTCTGTTCGCTCCCAGTGATGAGGCCTTCGCTGGTGTCAGCGACAGTGACATGGCTCTGCTCAGAGGTAATATGAATGCCCTGCGTACCATCCTGCTCTACCACTTCAGTAACGGAGTGTTCATCGGCGGAGGTTTGGAGACTGGGGTGACCAACCTCCTCAAGTCTCTGCAGGGAAACAACCTCCGAGTGCTGCATgctAACAACACAATTAGAGTGAACACTATTGAGGTCCctgaaaatgatatcatggccaCTAACGGAGTCATTCACTTTGTCAAAACCCTCCTCTACCCCGGAGAGCTGCCTGCTGGAAACTCTGACCTTCTGGGGCTGCTGAGAAGACTCATCAAGTACATGGAGATCAAGTTTGTGTCAGGATACAGATATAAGGAAATCCCTCTCACATTCATGAAGAGGACGATCGTCACACGCGTCATTGAGTCAGcGCCTGATGTGACCCACGTGACTAGGGTTATCGAAAGGGAACCTACTATCACCAAGGTGACCAGGGTGATTGAGGGACAGCCTACCATCACCAAGGTGACTAGAGTCATTGAAGGCGAGCCAAAGTTCACCAAGGTCACTAGAGTCATCGAGGGAGAGCCCAAGGTCACCAAAGTTACCAGAGTGGTCTCAGGTCCTCAGTACTCGGCCAGCAGCAGTGGCTCCAGCAGTGGTATCTCCAACATTGAGCTGGAAGGTGCTGACTTCTCCCGTATCACCACCATCGAGGGAAACCCCTCAATGCTCGACATGGACTCTGAAAAAATCACCAAGTTCATCCAAGAGGGAAACCCGAGACGAGTAACTGGCAGGAAAATTCCAGCTGGTGCCAGGAGGAGAGTCAGACCAGAGGAACAAAGAGCATAAACATGGACAGACCAGGTGACTAAAGATGCACCAGCAACCAGAGAGGAACAACAGAGATAATGTCAATGAATGGTCTCCCATAAAAGCTCTACACTCCAAATGATGCGTGTGTAGACATACAGAACTTGAACTTAGTGAGACCAGTAAAGCCATTtgctaaacaaaacaaaaatcatTGATGCATGTATCTAAAGATAACTAAAAGCCATCAAGATATGTAAATAGCGTACGCATATTTGTGGGTTTTCGGTGTATATTAGAGATGAAAGATTAGAAGCTAGCCAGGGGTAGCAAAATAATCTTTGAAACCAATCTTTTGAAAGCCTCGACCATTGGTTGAGGTGATACAACAGGATTTTTAGGAAGATTTTGTAATTTACCTCTGCATGATATCGAGTTTGTGGTGctcacataaaaataaaaataataaaaaataaaatgtga

Function

NR:

description
periostin-like isoform X2

GO: NA

KEGG:

id description
K24790 POSTN; periostin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582380.2 False 3196 mRNA 0.49 24 14839172 14873526
XM_021582381.2 True 3024 mRNA 0.50 24 14839332 14873526

Neighbor

gene id symbol gene type direction distance location
rsf1a LOC106612877 coding downstream 78999 14740571 ~ 14760173 (-)
LOC110503827 LOC106612879 coding downstream 104534 14728963 ~ 14734638 (-)
LOC110503826 LOC106612881 coding downstream 118353 14703576 ~ 14720819 (-)
LOC110503346 LOC106580992 coding downstream 141733 14687807 ~ 14697439 (-)
LOC110503824 NA coding downstream 152400 14624102 ~ 14686972 (-)
LOC110503831 LOC106612758 coding upstream 4836 14878362 ~ 14913662 (-)
LOC110503833 LOC106612871 coding upstream 233853 15107379 ~ 15148479 (-)
LOC110503834 LOC106612757 coding upstream 279337 15152863 ~ 15167618 (-)
LOC110503835 LOC106612869 coding upstream 297414 15170940 ~ 15179778 (-)
LOC110503349 LOC106612868 coding upstream 378931 15252457 ~ 15298489 (-)
G1905428 NA non-coding downstream 48775 14789970 ~ 14790397 (-)
ompa LOC106612885 non-coding downstream 155167 14639806 ~ 14684005 (-)
G1905350 NA non-coding downstream 217278 14621680 ~ 14621894 (-)
G1905718 NA non-coding upstream 19126 14892652 ~ 14894189 (-)
G1905722 NA non-coding upstream 27093 14900619 ~ 14903836 (-)
G1905732 NA non-coding upstream 52288 14925814 ~ 14926212 (-)
G1905742 NA non-coding upstream 73700 14947226 ~ 14947452 (-)
G1905756 LOC106612873 non-coding upstream 102533 14976059 ~ 14977116 (-)
G1905324 LOC106612883 other downstream 183898 14622195 ~ 14655274 (-)
G1905348 NA other downstream 217800 14619663 ~ 14621372 (-)
G1904919 NA other downstream 624652 14180063 ~ 14214520 (-)
G1904877 NA other downstream 696444 14089722 ~ 14142728 (-)
G1904846 spg20 other downstream 795723 14042970 ~ 14043449 (-)
G1905737 NA other upstream 67164 14940690 ~ 14941172 (-)
G1905741 NA other upstream 72472 14945998 ~ 14946447 (-)
G1905780 NA other upstream 209783 15083309 ~ 15084752 (-)
G1906115 NA other upstream 480414 15353940 ~ 15354573 (-)

Expression


Co-expression Network