LOC110503834 (LOC106612757)


Basic Information

Item Value
gene id LOC110503834
gene name LOC106612757
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 15152863 ~ 15167618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582386.2
TAgttagcacagccacaaagtcgtaATTATAGCTAAACCCCGCCCATTTCTACAATTgatcttcttaaaatctgattttaaacctaaccgtgaccttaaccacactgctaatcttatgcctaaccctaaattTAAATTAAcaacaaaattattattttttttggcCAATTTTGACTATGTAGCTGTGGCACTTGACTTTGTGTATGTATTATCTAGTGGAAACCTGACAGCGCTGGTAGTGGTCCAGTGGTAGTAGTCAACTCAACTCACACCTCTGATGTTGAAGTTTGAAGAGGAAGGCGTCGGACTAACTACTGGATTGAATTGTAGTTTTTGTTTTTTCGAAATAGTTTTTACTCTTGGTGGAACGTTGGATATCGAGCAGGGGGGTTCAATCAAGGAAAAGGATTAAATCACCCTCTTCAATAATTGGTATTCAACACTAATTGAATAACATTTATGTGACACTTTACGTGTACAAAATGGAGGTGATGATGAAGCCATAATGATGATACCATGATCTGTTCCTGATCCTTGGTCCATCTAATTCCTTTAAACTTAAGATGGAATCAGCAATcgctccaccaccacctcctcctccaccacctccccttgccccaccaccacctcctcctcctccaccacctccccttgcccccccaccacctcccccctgcccccctcccccaggcccccctcctccccctggcaTAGGCTTCGGGCCATCCACAGGCCGCCAGCTTAACGTCTCCAAGATGCGTAACTTCAACTGGGATGCGATCCCCAAACACGTGGTGGTGGGCAAACACAACATCTGGACGGAAGAGAAGACCCTGGGAGAGTATGAGCTGGACACTAGGAGGATTGAGGAGCTGTTCAGTCATAGccagcagcagggacagggacaaaAGGCtctgaacagacagagtatcAGAGGCAAGCCAACCAACAGCCAGGGCACAGAAGTGGTCTCCATTCTGAACTCCAAGAGGAGCATGAATGTTGGGATCTTCCTGAAACAGTTCAAGAGGCCAGTAGGGGACATGATCAAGGACATCAGTTCAGGAAACGGACTGAAATTTGGGACAGGTAAACTGAAGGAGCTGTGTAAGCTGCTGCCAGAGAAAGAAGAGgtgaagCAGCTAGTTGGGTTTAAAGGGGACCAGTCAGCTCTTCCTGAAGCAGACCTGTTTATGATGCTACTTATCAAGGTTCccagTTATGAGGAGCGCCTCAACAGTTTAGTTCTCAAAGAAGAGTTTTTTCCACTCATGGATGAAATGAAACAATCCATCGCCACCATGATCACAGCTGGAAAAGaGCTGTTAGAGAGTGACGATCTACACTCTGTGATCCGCCTGGTTCTGAAGACTGGAAACTACATGAACGCTGGCGGCTATGCTGGCAGTGCCATTGGCTTCAGGATGGCATCGCTACTGAAACTAGTGGACACAAGGGCCAACAAACCAGGCATGAACCTCATGCACTATGTAGTCATGCAAGCTCAGAAGGTTGATGTGGCCCTGCTGAAATTCCCGGACAAACTCACACACATCGCTGATGCAGCAAGAATCCATAAGGAGGACATAGAGAGTGAGTTTCAGAGAGAATTGAAGAAAGTAAAGGAGGCGAAGGAGGAGGCGCAGAAACAGGAGGAGCTACGGGCTCAGATGGAGAACTTTCTCAAGGAAGCAGAGTGTCGTCTGGCTGAGACTGAGCTCTCTCTGCAGTCGCTGGGTTCAGTCAGTGACTCAGTGGCTGAGTACTTCTGTGAAGACCCCAGCAAGTTCAGACTGAATGAATGCTGCTCCATCTTCAACTCTTTCTGTGAGAAATTCCTGAAGGCCATCCAGGAGAACCGTGATCGTGAGGTGGCGGAGGTGAAGAGGAGAACCAGAGACAGACTGCTGAGTGATGCTAATGCTGCTAAACGCCGTTCCACCGCCACCTGCTCCATACGGGACAAGGCCGTGGAGGGTGTGGCCCTGGAGTCCGTACTACGGAAggtCCTGACCAGTCGTGTGTCCCAAAGGAGAAAAGGCTCGGGGATGCCCTCCCCCACCATTAGCAGACTGTCAGAGGTTCCCATTCAAGCAAACCTTCCCTCGGCAGAATGGGGAAATCGAGGTTGTGTCAAGGCCACGGAGGTGTGTAAGGAGAATGAGTGGAACTCAGCCAGAGATCTGGCTGGGACCTCTCAGAGTGACCAGAAGGACCAGTCCCACAGCAAAAGGAACCGGAAGGAGAATGTGGTTCCACATCCAGAGGAGACACAGCAGAACCCTAAGAAACCACATGGTTCTACACAGCCAACCAGGAGAACCGGTAGCAGCAGCTCCTTCTCCTGCATCTCCACAGGTAGACCCATCTCAGTGACGATGAAGGacaaggaggaaaaggaggaggaggagggaaatgaGGAAGAAGCCCAGAAGTTGCGTGAAGTGTCCAGGAAGGTTCTGAGGTATCAGAGCAGCCGTGGTAGTCTTTCGTCTGGGGAGTACGGCCTGGAGCAGCAGAAGTCTCCTAATGCCACCAATAATACTAACACCTCCACAAGATCACCCAACGCTACGACCACTAATGCTACAtcctccaccatctccaccatcacctccaccTCCCCTCACCAGAGGACCTTCCAAGAGGACAGACAGCGTCTGCTGGGAGATGCATGTAGAGGCAGCGAGAGCCTGGCTAGATACCTCCTCAACCCTCACCTCTCCCCCAAGGAAATACTCAACCGCAGACACACCTTCACCCTCACCCCTAAAGCCCCTCCtactgaggaagaggaagaggatgatctGTTTACTTTTCCTGCTACACCATCTCCTACTCTGGGGGTCACAGGGAGGATGAAGTCAGTAGACGCTGATCTGAAGTCCCTGAAACACAGAGCCTCTGGAGGACCTAACCTCACCAACCTCCCTGGCCACTCTGAGAAGCCTTGTGTCCGAGACCTGGTGTCTAAGAGCTCCATGTCAAAACACAAAGACTTGACAACAAGTCTCAACATCCCCAGGGACTCTGAAAACAGAGGCTTGGAGGTAGTCACCATCCCTCACCACTCTGAGACATCTGGTGCCCAGCAGGAGAAGGTGTCCAACAGCTTGTCAGCAGCAGAGAGACCTACACACGTAGAGCTAGGAGAGCTGAACCAAGACAAGAGCTCCTCTATAGTCAAGACAAAACCTCCCTCCTTACACCTAGAACTGAACCAGAACCAGGATGAGGAGATAAAGGAGTTTTCTCCCGCTCCTCTCCATATACTCGTCTCCCAGAAACCCAAACAGGCTGACCCTCCTCAGAGCCCCAAACACAATATGGCTAACCCTTCTAAGAGCCCAAAGCCCAAACTTTCAGAGGGCAACGGATTCATGTCTTTCTTTAAACGCCTGGGAGAGAGGAGCAAGCCAATGTGAGGAATCTGGTGTTCAAGACCTGATGTTCAAGACCTGATGTTCAAGACCTGGTGTTCAAGACCTGGTGTTCAAGACCTGGTGTACAAGAGTGTGAGCATAGAGACCTACACACACTTTGTCCAGGACACTTTGTCCAGGACAAAGGAGTCTGTCCTGGACAAGCCCTGAGCCCGAAGCCCAAACCAGACGGCTATGGATTGATGTCCTTCTTTGAACGCCTGGGGAAGAAGAGCAAGCCTTGCTAACAACAAGGATATAGACTCTAGACGTGCTCTAGACTCCTGATTAATCTATTAATTCAGATTCAGACTACTAAGGCAGATGTTTCATTGTTCTATGGACCTGGCCCTATGGactattaaatatatttatatccaTCCAGCCATTAATTTTATAAAGGTTTAATTCAAAGAGATTGTTGAAGTGGATTTGAAGTggaaaatgtatgatatgttggCACTGGGAGAATTTGTCCAAAAGTGCAGTGTGAACTTTATTCCACTAGGTGGCAGAGTGAGATAACAACGCCACATGTAGTGTGTCTGTAGGCCAGTGGTTcgcaaccaggggtactaggactcctaggggtacttggcctatcgaCAAAGGATACTTGAGAAGACTAATAcgaccataggcctactggtaaaatacACAAGAGGGGGAacttcaggggtactccaggcagagttaaattcagttggtggtacagtaaccaaaaacAGTTGGGAACCACCGCTGTAGGCCACCAACAAATGACTGTTTATTTATTCTACCACCACATATTCCCACAAAGAGGAGCATGACACTTACCCTAATTTGTTACAAATGTCTTTAATAATAGTGATATTCTTACATCAGTATTCTTCTCACTGAATATGCACAGCAAAATAAAACCACTGTTGAGTAGGAGGAGCCAATGTGATCTTTGTCTTGGAAAATACTGGAACTATCTTTGCCATTTACAGTAGTATTAAATTATATTGCCGGAGGATATATTTACAGAGCTGTAGAaatgacattcaattcatttCGAGCGACGAGGGCCTGTAAAGAGAAGTAAACAGTATTAAGATAAAAAATCATTTCATGGACAGACTGTTAAAGAATAAAAGTGTTTTGTATTACA
>XM_036961960.1
TAgttagcacagccacaaagtcgtaATTATAGCTAAACCCCGCCCATTTCTACAATTgatcttcttaaaatctgattttaaacctaaccgtgaccttaaccacactgctaatcttatgcctaaccctaaattTAAATTAAcaacaaaattattattttttttggcCAATTTTGACTATGTAGCTGTGGCACTTGACTTTGTGTATGTATTATCTAGTGGAAACCTGACAGCGCTGGTAGTGGTCCAGTGGTAGTAGTCAACTCAACTCACACCTCTGATGTTGAAGTTTGAAGAGGAAGGCGTCGGACTAACTACTGGATTGAATTGTAGTTTTTGTTTTTTCGAAATAGTTTTTACTCTTGGTGGAACGTTGGATATCGAGCAGGGGGGTTCAATCAAGGAAAAGGATTAAATCACCCTCTTCAATAATTGATGGAATCAGCAATcgctccaccaccacctcctcctccaccacctccccttgccccaccaccacctcctcctcctccaccacctccccttgcccccccaccacctcccccctgcccccctcccccaggcccccctcctccccctggcaTAGGCTTCGGGCCATCCACAGGCCGCCAGCTTAACGTCTCCAAGATGCGTAACTTCAACTGGGATGCGATCCCCAAACACGTGGTGGTGGGCAAACACAACATCTGGACGGAAGAGAAGACCCTGGGAGAGTATGAGCTGGACACTAGGAGGATTGAGGAGCTGTTCAGTCATAGccagcagcagggacagggacaaaAGGCtctgaacagacagagtatcAGAGGCAAGCCAACCAACAGCCAGGGCACAGAAGTGGTCTCCATTCTGAACTCCAAGAGGAGCATGAATGTTGGGATCTTCCTGAAACAGTTCAAGAGGCCAGTAGGGGACATGATCAAGGACATCAGTTCAGGAAACGGACTGAAATTTGGGACAGGTAAACTGAAGGAGCTGTGTAAGCTGCTGCCAGAGAAAGAAGAGgtgaagCAGCTAGTTGGGTTTAAAGGGGACCAGTCAGCTCTTCCTGAAGCAGACCTGTTTATGATGCTACTTATCAAGGTTCccagTTATGAGGAGCGCCTCAACAGTTTAGTTCTCAAAGAAGAGTTTTTTCCACTCATGGATGAAATGAAACAATCCATCGCCACCATGATCACAGCTGGAAAAGaGCTGTTAGAGAGTGACGATCTACACTCTGTGATCCGCCTGGTTCTGAAGACTGGAAACTACATGAACGCTGGCGGCTATGCTGGCAGTGCCATTGGCTTCAGGATGGCATCGCTACTGAAACTAGTGGACACAAGGGCCAACAAACCAGGCATGAACCTCATGCACTATGTAGTCATGCAAGCTCAGAAGGTTGATGTGGCCCTGCTGAAATTCCCGGACAAACTCACACACATCGCTGATGCAGCAAGAATCCATAAGGAGGACATAGAGAGTGAGTTTCAGAGAGAATTGAAGAAAGTAAAGGAGGCGAAGGAGGAGGCGCAGAAACAGGAGGAGCTACGGGCTCAGATGGAGAACTTTCTCAAGGAAGCAGAGTGTCGTCTGGCTGAGACTGAGCTCTCTCTGCAGTCGCTGGGTTCAGTCAGTGACTCAGTGGCTGAGTACTTCTGTGAAGACCCCAGCAAGTTCAGACTGAATGAATGCTGCTCCATCTTCAACTCTTTCTGTGAGAAATTCCTGAAGGCCATCCAGGAGAACCGTGATCGTGAGGTGGCGGAGGTGAAGAGGAGAACCAGAGACAGACTGCTGAGTGATGCTAATGCTGCTAAACGCCGTTCCACCGCCACCTGCTCCATACGGGACAAGGCCGTGGAGGGTGTGGCCCTGGAGTCCGTACTACGGAAggtCCTGACCAGTCGTGTGTCCCAAAGGAGAAAAGGCTCGGGGATGCCCTCCCCCACCATTAGCAGACTGTCAGAGGTTCCCATTCAAGCAAACCTTCCCTCGGCAGAATGGGGAAATCGAGGTTGTGTCAAGGCCACGGAGGTGTGTAAGGAGAATGAGTGGAACTCAGCCAGAGATCTGGCTGGGACCTCTCAGAGTGACCAGAAGGACCAGTCCCACAGCAAAAGGAACCGGAAGGAGAATGTGGTTCCACATCCAGAGGAGACACAGCAGAACCCTAAGAAACCACATGGTTCTACACAGCCAACCAGGAGAACCGGTAGCAGCAGCTCCTTCTCCTGCATCTCCACAGGTAGACCCATCTCAGTGACGATGAAGGacaaggaggaaaaggaggaggaggagggaaatgaGGAAGAAGCCCAGAAGTTGCGTGAAGTGTCCAGGAAGGTTCTGAGGTATCAGAGCAGCCGTGGTAGTCTTTCGTCTGGGGAGTACGGCCTGGAGCAGCAGAAGTCTCCTAATGCCACCAATAATACTAACACCTCCACAAGATCACCCAACGCTACGACCACTAATGCTACAtcctccaccatctccaccatcacctccaccTCCCCTCACCAGAGGACCTTCCAAGAGGACAGACAGCGTCTGCTGGGAGATGCATGTAGAGGCAGCGAGAGCCTGGCTAGATACCTCCTCAACCCTCACCTCTCCCCCAAGGAAATACTCAACCGCAGACACACCTTCACCCTCACCCCTAAAGCCCCTCCtactgaggaagaggaagaggatgatctGTTTACTTTTCCTGCTACACCATCTCCTACTCTGGGGGTCACAGGGAGGATGAAGTCAGTAGACGCTGATCTGAAGTCCCTGAAACACAGAGCCTCTGGAGGACCTAACCTCACCAACCTCCCTGGCCACTCTGAGAAGCCTTGTGTCCGAGACCTGGTGTCTAAGAGCTCCATGTCAAAACACAAAGACTTGACAACAAGTCTCAACATCCCCAGGGACTCTGAAAACAGAGGCTTGGAGGTAGTCACCATCCCTCACCACTCTGAGACATCTGGTGCCCAGCAGGAGAAGGTGTCCAACAGCTTGTCAGCAGCAGAGAGACCTACACACGTAGAGCTAGGAGAGCTGAACCAAGACAAGAGCTCCTCTATAGTCAAGACAAAACCTCCCTCCTTACACCTAGAACTGAACCAGAACCAGGATGAGGAGATAAAGGAGTTTTCTCCCGCTCCTCTCCATATACTCGTCTCCCAGAAACCCAAACAGGCTGACCCTCCTCAGAGCCCCAAACACAATATGGCTAACCCTTCTAAGAGCCCAAAGCCCAAACTTTCAGAGGGCAACGGATTCATGTCTTTCTTTAAACGCCTGGGAGAGAGGAGCAAGCCAATGTGAGGAATCTGGTGTTCAAGACCTGATGTTCAAGACCTGATGTTCAAGACCTGGTGTTCAAGACCTGGTGTTCAAGACCTGGTGTACAAGAGTGTGAGCATAGAGACCTACACACACTTTGTCCAGGACACTTTGTCCAGGACAAAGGAGTCTGTCCTGGACAAGCCCTGAGCCCGAAGCCCAAACCAGACGGCTATGGATTGATGTCCTTCTTTGAACGCCTGGGGAAGAAGAGCAAGCCTTGCTAACAACAAGGATATAGACTCTAGACGTGCTCTAGACTCCTGATTAATCTATTAATTCAGATTCAGACTACTAAGGCAGATGTTTCATTGTTCTATGGACCTGGCCCTATGGactattaaatatatttatatccaTCCAGCCATTAATTTTATAAAGGTTTAATTCAAAGAGATTGTTGAAGTGGATTTGAAGTggaaaatgtatgatatgttggCACTGGGAGAATTTGTCCAAAAGTGCAGTGTGAACTTTATTCCACTAGGTGGCAGAGTGAGATAACAACGCCACATGTAGTGTGTCTGTAGGCCAGTGGTTcgcaaccaggggtactaggactcctaggggtacttggcctatcgaCAAAGGATACTTGAGAAGACTAATAcgaccataggcctactggtaaaatacACAAGAGGGGGAacttcaggggtactccaggcagagttaaattcagttggtggtacagtaaccaaaaacAGTTGGGAACCACCGCTGTAGGCCACCAACAAATGACTGTTTATTTATTCTACCACCACATATTCCCACAAAGAGGAGCATGACACTTACCCTAATTTGTTACAAATGTCTTTAATAATAGTGATATTCTTACATCAGTATTCTTCTCACTGAATATGCACAGCAAAATAAAACCACTGTTGAGTAGGAGGAGCCAATGTGATCTTTGTCTTGGAAAATACTGGAACTATCTTTGCCATTTACAGTAGTATTAAATTATATTGCCGGAGGATATATTTACAGAGCTGTAGAaatgacattcaattcatttCGAGCGACGAGGGCCTGTAAAGAGAAGTAAACAGTATTAAGATAAAAAATCATTTCATGGACAGACTGTTAAAGAATAAAAGTGTTTTGTATTACA

Function

NR:

description
inverted formin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582386.2 False 4554 mRNA 0.48 13 15152863 15167618
XM_036961960.1 True 4423 mRNA 0.48 14 15152863 15167618

Neighbor

gene id symbol gene type direction distance location
LOC110503833 LOC106612871 coding downstream 4384 15107379 ~ 15148479 (-)
LOC110503831 LOC106612758 coding downstream 239201 14878362 ~ 14913662 (-)
LOC110503830 LOC106612876 coding downstream 279337 14839172 ~ 14873526 (-)
rsf1a LOC106612877 coding downstream 392690 14740571 ~ 14760173 (-)
LOC110503827 LOC106612879 coding downstream 418225 14728963 ~ 14734638 (-)
LOC110503835 LOC106612869 coding upstream 3322 15170940 ~ 15179778 (-)
LOC110503349 LOC106612868 coding upstream 84839 15252457 ~ 15298489 (-)
LOC110503839 LOC106612868 coding upstream 247919 15415537 ~ 15443172 (-)
LOC110503840 LOC106612866 coding upstream 431465 15599083 ~ 15631487 (-)
LOC110503841 LOC106612865 coding upstream 486933 15654551 ~ 15664281 (-)
G1905800 LOC106612870 non-coding downstream 56908 15095459 ~ 15095955 (-)
G1905777 NA non-coding downstream 140368 15012233 ~ 15012495 (-)
G1905771 NA non-coding downstream 149219 15003403 ~ 15003644 (-)
G1905768 NA non-coding downstream 158708 14993924 ~ 14994155 (-)
G1905764 NA non-coding downstream 164372 14988258 ~ 14988491 (-)
G1905875 NA non-coding upstream 44955 15212573 ~ 15212906 (-)
G1905912 NA non-coding upstream 70566 15238184 ~ 15238424 (-)
G1906046 NA non-coding upstream 80715 15248333 ~ 15248549 (-)
G1906048 NA non-coding upstream 81830 15249448 ~ 15249650 (-)
G1906049 NA non-coding upstream 82075 15249693 ~ 15250162 (-)
G1905780 NA other downstream 68111 15083309 ~ 15084752 (-)
G1905741 NA other downstream 206416 14945998 ~ 14946447 (-)
G1905737 NA other downstream 211691 14940690 ~ 14941172 (-)
G1905324 LOC106612883 other downstream 497589 14622195 ~ 14655274 (-)
G1905348 NA other downstream 531491 14619663 ~ 14621372 (-)
G1906115 NA other upstream 186322 15353940 ~ 15354573 (-)
G1906198 NA other upstream 332586 15500204 ~ 15500760 (-)
G1906218 NA other upstream 344741 15512359 ~ 15513093 (-)
LOC110503846 NA other upstream 869369 16036987 ~ 16044740 (-)

Expression


Co-expression Network