aipl1 (LOC106612843)


Basic Information

Item Value
gene id aipl1
gene name LOC106612843
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 16413685 ~ 16422281 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021582422.2
CCCTTTCCTAATCATCAAGGAGTAATGTGTGTTCATACCTCTCTATGCCTCACACCTGCTATAAACTAGCCTAGCAgaaacacatacagacagacacacattatatacacacacctaTTTATTTattctacacagacagacagccatacAGAAAAATGTCTTCAGATATGGATGGGACCATGCTCCTGGGGGTGGAAGGCATTAAGAAAACCATCCTGTATGGAGGGACAGCTGAGATGCCCCGGTTCATTACTGGGACCAAGGTGACCTTCCATTTCCGTACCCAGCTGTGTGATGATGATCGTACGGTGATAGACGACAGTAAGGTGACGGGCGTGCCAATGGAGGTGGTGATCGGGAACATGTTCAAGCTGGAGATCTGGGAGACCCTGCTCACCTCCATGAGGATCGGAGAGGTGGCCGAGTTCTGGTGCGATGTCACCcACACTGGCCTCTACCCCCTGGTGGCCAAGAGCTTGCGGCGCATCGCGGAGGGCAAGGACCCTGTGGACTGGCACATCCATTCGTGTGGCATGGCCAACATGTTTGCCTACCACACCCTGGGCTATGATGACCTGGACCAGCTACAGAAGGAGCCTCAGCCTCTCTACTTTGTACTGGAACTGGTCAAGGTGCAGCAGCCCAGTGAGTATGACAGGGAGTCGTGGGCTCTGAATGATGAGGAGAGACTGAAGGCTGTGCCCTTGCTCCACGGCCAGGGGAACAAGCTCTACAAACTGGGGCGCTACCAGGACGCCACCAACAAATACAAAGAGGCCATAGTCTGCATCAAGAACATACAGCACAAGGAGAAAGCATGGGAAGCCCCCTGGCTGAAGCTAGAGAAGATGGGGAACATGCTGACTCTCAACTACTGCCAGTGTCTGCTCCGTATGGAGGAGTATTATGAGGTCATAGAGCACACCAGTGACATCATCAATCAGCACCCAGGTGAAATGAAGGCGTTCTACGTGCGAGGGAAGGCCCACATTGAGGTGTGGAACGAAGCTGAGGCGCGGGCTGACTTTGAGAGGGTTCTAGATCTGGACCCTGGCATGAAGAAGGCTGTTAAGAAGGACCTGGGTGTCCTCAACATGAGGATGGAGGAGAAGAATGAGGAGGATAAAGTCAAGTACAAGGGCATGTTCTGACAAGGCCCAGGAGATATGCAGATATGGAGGGGGAGGGTCAATGTCAAAGTTAAAGTGGACAGCACAGATGGTGcttgtggaggaagagaggagagatgggcaaagcaggagtgagagaaagagagagaaaatgtatcCTAGATCATTGTTACTTATTTATCTATGTTTTTCCTGGAACATTGTTTGGTGGTCAATCCATTTGGGTAGAACATGTATCCATTATGTCTGACTTGAATGGTTGAAGCCCAACAAGTACTGCATCCAGtcataaaatgcaaataaatctTGGTGTAGATTATGTACTCATCAGATATTGAATGAA

Function

NR:

description
PREDICTED: aryl-hydrocarbon-interacting protein-like 1

GO:

id name namespace
GO:0006457 protein folding biological_process

KEGG:

id description
K17767 AIP, XAP2; AH receptor-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021582422.2 True 1473 mRNA 0.50 6 16413685 16422281

Neighbor

gene id symbol gene type direction distance location
LOC110503859 LOC106612846 coding downstream 6311 16393276 ~ 16407374 (-)
LOC110503854 LOC106612853 coding downstream 179056 16227571 ~ 16234629 (-)
LOC110503852 LOC106612852 coding downstream 189188 16198046 ~ 16224497 (-)
slc46a1 slc46a1 coding downstream 275172 16133164 ~ 16138513 (-)
LOC110503846 NA coding downstream 368945 16036987 ~ 16044740 (-)
abhd15a LOC106612842 coding upstream 83731 16506012 ~ 16515306 (-)
LOC110503865 rflnb coding upstream 133481 16555762 ~ 16558682 (-)
LOC110503864 vps53 coding upstream 137479 16559760 ~ 16591432 (-)
LOC110503875 LOC106612835 coding upstream 411237 16833518 ~ 16913657 (-)
LOC110503880 LOC106612833 coding upstream 498826 16921107 ~ 16993293 (-)
G1908067 NA non-coding downstream 85546 16327709 ~ 16328139 (-)
G1908004 LOC106612850 non-coding downstream 148932 16262574 ~ 16264753 (-)
G1907962 NA non-coding downstream 228197 16185035 ~ 16185488 (-)
G1907914 NA non-coding downstream 282438 16130812 ~ 16131247 (-)
G1907940 NA non-coding downstream 298258 16115049 ~ 16115427 (-)
G1908029 NA non-coding upstream 39139 16461420 ~ 16476960 (-)
G1908202 LOC106612839 non-coding upstream 195691 16617972 ~ 16622138 (-)
G1908230 LOC106612838 non-coding upstream 213356 16635637 ~ 16641190 (-)
G1908235 NA non-coding upstream 225054 16647335 ~ 16647565 (-)
G1908269 NA non-coding upstream 292885 16715166 ~ 16721539 (-)
G1907951 NA other downstream 252459 16158846 ~ 16161226 (-)
G1907922 NA other downstream 281123 16131990 ~ 16132562 (-)
G1906218 NA other downstream 900592 15512359 ~ 15513093 (-)
G1906198 NA other downstream 912925 15500204 ~ 15500760 (-)
LOC118944080 LOC106612823 other upstream 855526 17277554 ~ 17278524 (-)
LOC110503924 LOC107554284 other upstream 2009743 18432024 ~ 18434798 (-)
LOC110503944 LOC106612932 other upstream 2545781 18968062 ~ 19185772 (-)
G1910398 NA other upstream 2738168 19160449 ~ 19162158 (-)
G1910539 NA other upstream 2910560 19332841 ~ 19333225 (-)

Expression


Co-expression Network